Downloading with Aspera
1
0
Entering edit mode
22 months ago
FRANCESCA ▴ 10

Hi, I'm trying to download gvcf from 1000 genomes with aspera, but I have the following problem... I enter the following command (on windows):

ascp -i C:\Program Files (x86)\Aspera\Aspera Connect\etc\asperaweb_id_dsa.openssh; -Tr -Q -l 100M -
P33001 -L- fasp-g1k@fasp.1000genomes.ebi.ac.uk:vol1/ftp/release/20100804/ALL.2of4intersection.20100804.genotypes.vcf.gz
bash: syntax error near unexpected token '('

Thanks!

gvcf • 834 views
ADD COMMENT
1
Entering edit mode
22 months ago
ATpoint 82k

It is a problem of unescaped whitespaces, you have to quote it: https://superuser.com/questions/279008/how-do-i-escape-spaces-in-command-line-in-windows-without-using-quotation-marks

ascp -i "C:\Program Files (x86)\Aspera\Aspera Connect\etc\asperaweb_id_dsa.openssh" -Tr -Q -l 10 (...)

something like this probably.

ADD COMMENT
0
Entering edit mode

But now Iappears: ascp.exe: no remote host specified Should be placed at the end: local/target/directory?

ADD REPLY
1
Entering edit mode

Yes.

ADD REPLY

Login before adding your answer.

Traffic: 2207 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6