Entering edit mode
21 months ago
Xylanaser
▴
80
Hi I'm trying to run pfam_scan.pl
. I'm using conda but there's perl from ubuntu system. It conflicts with another? Or script can't see modules?
$ pfam_scan.pl
Can't locate Moose.pm in @INC (you may need to install the Moose module) (@INC contains: /home/marcin/anaconda3/share/pfam_scan-1.6-4 /home/marcin/anaconda3/lib/perl5/5.32/site_perl /home/marcin/anaconda3/lib/perl5/site_perl /home/marcin/anaconda3/lib/perl5/5.32/vendor_perl /home/marcin/anaconda3/lib/perl5/vendor_perl /home/marcin/anaconda3/lib/perl5/5.32/core_perl /home/marcin/anaconda3/lib/perl5/core_perl .) at /home/marcin/anaconda3/share/pfam_scan-1.6-4/Bio/Pfam/HMM/HMMResultsIO.pm line 50.
:(
try creating a brand new conda environment ?
And or copying Moose.pm to one of the directories listed in your
@INC
egfind it with