News:course - Unix and shell scripting for bioinformatics
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8 weeks ago
carlopecoraro2 ★ 2.2k

Dear all,

applications are now open for the 3rd edition of the Physalia course "Unix and shell scripting for bioinformatics"

Dates: ONLINE, 16th-20th of January


In this course, students will be introduced to the most powerful Unix commands and they will learn how to connect to external resources/servers, install specialist tools and ultimately to combine commands into scripts for automation and reproducibility. Hands-on sessions will focus on applying those tools to process biological data, explicitly next-generation sequencing (NGS) data.

This course assumes no prior knowledge of Unix and shell scripting. Since most examples will be focused on biological data, some background in biology is desired.

Learning outcomes:

1) Mastering most popular Unix commands 2) Creating and editing files using the command line 3) Processing large files using Unix and bash scripting 4) Automating bioinformatics pipelines by writing shell scripts 5) Managing system tasks and resources usage

Here is the full list of our courses and Workshops: https://www.physalia-courses.org/courses-workshops/

Bioinformatics scripting Shell Unix bash • 182 views
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