Entering edit mode
5 months ago
bioinformatics.girl
▴
10
I ran the following bedtools job commanding the following:
bedtools bamtobed -I bam_file.bam
Now, how do I get from this to calling peaks in MACS within Signac (I have generated a _summits.bed, peak_annotation.tsv, _peaks.xls, and .narrowPeak file). Please provide code as the tutorial is not clear enough for me.