Entering edit mode
18 months ago
ahkam.s
•
0
I need to benchmark the (germline and somatic) variant identification pipeline which uses RNA seq data alone without any matched-normal. I would like to know the reference dataset (and the pipeline on which the dataset was run) that can I use to compare the pipeline results on my dataset. The reference dataset which I use should be comparable regardless of the dataset specific to certain disease. Please correct me if I am wrong. Thanks all in advance for your responses.