Question

How can I get sample sequence from bam file?

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2.9 years ago

ongchip • 0

screenshot of IGV

Hello. I produced BAM files and opened it with IGV. I can check SNPs, InDels of my samples compared with the reference genome. Then, how can I get the full sequences of my samples?

BAM • 706 views

ADD COMMENT • link updated 2.9 years ago by GenoMax 154k • written 2.9 years ago by ongchip • 0

score 1 · Answer 1 · 2022-12-01

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2.9 years ago

GenoMax 154k

Follow this tutorial to get a consensus: Generating consensus sequence from bam file

ADD COMMENT • link 2.9 years ago by GenoMax 154k