Entering edit mode
17 months ago
lincaijin1994
▴
40
I've downloaded copy number data from ICGC portal but I found it provided only the mutation type (copy neutral, copy neutral LOH, gain, loss) and segment mean (integer) for each segment but not the copy number alterations status (-2, -1, 0, 1, 2) for specific genes. I'm wondering how to estimate the gene-level copy number alteration status.