Diamond makedb --Error: Invalid taxonomic rank
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16 months ago
327362511 • 0

I want to run diamond and also get taxon identifiers for each hit by using the following command:

Command

diamond makedb --in nr --db nr_diamond --taxonmap prot.accession2taxid --taxonnodes nodes.dmp

Output:

Error:Invalid taxonomic rank 

I get the file from ftp://ftp.ncbi.nlm.nih.gov/. I don't know how to solve this problem . Is there anybody who can help me?

Diamond • 577 views
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What diamond version are you using? You may need to update to the latest version.

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