I am wondering how to run delly with multi-threading mode? Actually there is a guideline on the manually page, which indicates to use openMP API to do this. But the manually guideline is too simple to follow for me. This is the github manual page: https://github.com/dellytools/delly.
They just said:
Delly supports parallel computing using the OpenMP API (www.openmp.org).
make PARALLEL=1 -B src/delly
You can set the number of threads using the environment variable OMP_NUM_THREADS.
export OMP_NUM_THREADS=2 Delly primarily parallelizes on the sample level. Hence, OMP_NUM_THREADS should be always smaller or equal to the number of input samples.*
But I don't know how to use OpenMP API. Does anyone know exactly how to do?