How can two contradicted gene sets be enriched in a cancer sample in GSEA analysis?
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7 days ago
Amr ▴ 140

How can two contradicted gene sets be enriched in a cancer sample in GSEA analysis? For example in GSEA analysis of cancer sample vs normal sample, How can HALLMARK_UV_RESPONSE_UP and HALLMARK_UV_RESPONSE_DN be enriched in a cancer sample at the same time? What does it mean?

HALLMARK_UV_RESPONSE_UP GSEA • 94 views
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