How to import downloaded multiple TCGA data in R?

Question

[Zahra]

Hi all, I want to import the TCGA data I previously downloaded using the TCGAbiolinks package into R. Whenever I want to import them, I must use GDCquery() and GDCprepare(). Is there any way to import data without using these functions? Indeed, the data I downloaded before is now unavailable on the TCGA database so there is no way but to import the downloaded data. Thanks for any help.

Answer 1

[ATpoint]

Data, that can be anything from a spreadsheet to a sql database. Please be more specific, show something to give an idea what 'data' format you even have.