Problem on creating database

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2.3 years ago

Neeraj Kumar Singh • 0

I am facing problem on creating database. I downloaded bacterial wgs but on creating local database it is giving error after running for an hour and more (This is that exact output):

Building a new DB, current time: 06/23/2023 18:21:44
New DB name:   /media/gmpl/G_My_Passport_2TB1/WGS_BACTERIA_NCBI_refseq/bacterial_genome
New DB title:  bacterial_genome
Sequence type: Nucleotide
Deleted existing Nucleotide BLAST database named /media/gmpl/G_My_Passport_2TB1/WGS_BACTERIA_NCBI_refseq/bacterial_genome
Keep MBits: T
Maximum file size: 3000000000B

BLAST failed to write output

blast • 712 views

ADD COMMENT • link updated 2.3 years ago by Ram 45k • written 2.3 years ago by Neeraj Kumar Singh • 0

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It appears that you are trying to use an external USB drive (looking at the name)? This is likely not going to work since the amount of data I/O is probably not going to be able to keep up over USB interface.