could not find function "gseGO" in ClusterProfiler
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11 months ago
Nitin • 0

I am trying to run the code using the example data set,

gse <- gseGO(geneList=gene_list,
ont ="ALL",
keyType = "ENSEMBL",
nPerm = 10000,
minGSSize = 3,
maxGSSize = 800,
pvalueCutoff = 0.05,
verbose = TRUE,
OrgDb = org.Dm.eg.db,
pAdjustMethod = "none")

However I see the following error

Error in gseGO(geneList = gene_list, ont = "ALL", keyType = "ENSEMBL", :
could not find function "gseGO".
ClusterProfiler R gseGO • 807 views
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