Entering edit mode
9 months ago
BATMAN
•
0
Hello, how is it going?
I was wondering if you can help me with the following. I ran a blast of my own sequences against a custom database, and I would like to match the two lists according to the access code to be able to display the results in the first column of List1 in the blast result (list 2).
List 1: separated by tabulation
GH5_42 Bacteria Aquimarina sp. TRL1 QKX03962.1
GH5 Viruses Aquipluma nitroreducens MeG22 BBE16908.1
GH5_13 Euka Aquipluma neros Miu BBE17787.1
GH5_1 Bacteria Aquimarina sp. BL5 AXT53262.1
GH5_1 Bacteria Aquimarina sp. BL5 AXT51693.1
GH5_2 Bacteria Aquimarina sp. BL5 AXT51262.1
GH5_2 Bacteria Aquimarina sp. BL5 AXT50092.1
GH5_2 Bacteria Aquimarina sp. BL5 AXT51607.1
GH5_7 Bacteria Aquimarina sp. BL5 AXT53265.1
GH5_42 Bacteria Aquimarina sp. BL5 AXT52587.1
List 2: separated by space
QKX03962.1 Endoglucanase A precursor [Aquimarina sp. TRL1] 261 4e-81
BBE16908.1 Endoglucanase 5 precursor [Aquipluma nitroreducens MeG22] 260 1e-80
BBE17787.1 glycoside hydrolase family 5 [Aquipluma neros Miu] 256 1e-80
I hope to have this output:
GH5_42 Bacteria QKX03962.1 Endoglucanase A precursor [Aquimarina sp. TRL1] 261 4e-81
GH5 Viruses BBE16908.1 Endoglucanase 5 precursor [Aquipluma nitroreducens MeG22] 260 1e-80
GH5_13 Euka BBE17787.1 glycoside hydrolase family 5 [Aquipluma neros Miu] 256 1e-80