Converting gene id to entrez id with clusterprofiler

Question

[sumitra.20]

Hi,

Im new to R and i've been trying to use clusterprofiler to convert my gene_ids to entrez_id for further analysis. I work on the msu7 rice genome and my gene ids looks like this (LOC_Os08g09610, LOC_Os06g05660). Since, it was a non-model organism i tried creating new annotation and ended up with an error. I might be doing a very silly mistake here, but i get error that says there is no package in the path. Also, im not really sure if the kind of gene_id i have will be applicable to these functions, my final goal is to eventually perform KEGG enrichment. Any help will be appreciated. (On a side note, i tried posting this on bioconducter but for some reason im not able to post any questions there, not sure what's wrong)

```

library(AnnotationHub)
ah = AnnotationHub::AnnotationHub()  
SL<-AnnotationHub::query(ah, c("Oryza", "Japonica"))
SL_OrgDb <- SL[["AH91623"]]


library(clusterProfiler)
genes2<-read.table("./deg_gene_list.txt")
geneList<-genes2
geneList1<-(geneList$V1)  

gene.df <- bitr(geneList1, fromType = c("GENENAME"),
                toType = "ENTREZID",
                OrgDb = SL_OrgDb)

Error in loadNamespace(name) : 
  there is no package called ‘/home/combio7/.cache/R/AnnotationHub/92e64320d6b3d_98369’


> SL_OrgDb
                                                   AH91623 
"/home/combio7/.cache/R/AnnotationHub/92e64320d6b3d_98369" 

[GenoMax]

Based on locus search here: http://rice.uga.edu/analyses_search_locus.shtml this looks like Oryza sativa nipponbare genome. NCBI's official genome page is here: https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_001433935.1/