I try to use this vignette on my single cell multiome data and not sure how to get the gene to run the function below. The data from endothelial cell and fibroblast. Would you please have a suggestion? I appreciate your input!
motif.name <- ConvertMotifID(data, name = 'PECAM1') gene_plot <- FeaturePlot(data, features = "sct_PECAM1", reduction = 'wnn.umap') motif_plot <- FeaturePlot(data, features = motif.name, min.cutoff = 0, cols = c("lightgrey", "darkred"), reduction = 'wnn.umap') Error: None of the requested features were found: NA in slot data
Update: the gene from the output of
head(topTFs("NK"), 3). No more error now.