Hi, I'm struggling trying to reverse complement some mitochondrial genome sequences, I blastned hundreds of mitogenome fasta files resulted in something like this:
C11_2.txt plus D12_2.txt minus FG18_2.txt minus
Everyone of these .txt have an associated .fasta sequence like this:
C11_2.fasta >C11_2 ATCTTTAAACCCCCCC D12_2.fasta >D12_2 AAAAAAATTTTGGGGG
I want to reverse complement only those .fasta files for which the associated .txt have minus.
I'm mainly familiarized with bash.
Thanks for the help!