Entering edit mode
15 months ago
Oscar
▴
30
Hi, I'm struggling trying to reverse complement some mitochondrial genome sequences, I blastned hundreds of mitogenome fasta files resulted in something like this:
C11_2.txt
plus
D12_2.txt
minus
FG18_2.txt
minus
Everyone of these .txt have an associated .fasta sequence like this:
C11_2.fasta
>C11_2
ATCTTTAAACCCCCCC
D12_2.fasta
>D12_2
AAAAAAATTTTGGGGG
I want to reverse complement only those .fasta files for which the associated .txt have minus.
I'm mainly familiarized with bash.
Thanks for the help!