How to subsample ATAC fragment file?
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4 months ago
bioinfo ▴ 140

Hello,

I have 5 single cell ATAC samples that I have started analyzing with SnapATAC2. My WT samples have about twice the amount of cells as my knock outs and that is why I would like to do the analysis with all the cells and then I would like to subsample the WT so they have similar cell numbers to the knock outs. How can I do that?

Thank you

single cell RNA atac seq • 248 views
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