I am trying to install use Kraken2 locally and am getting the error:
kraken2: database ("./mydb") does not contain necessary file taxo.k2d
The database was built with the standard command:
kraken2-build --standard --db mydb
I don't understand why this database would not contain the necessary files, I am not trying to build a custom database. Thank you to whoever mentioned in my other thread that the way this program works is by loading the entire database into memory. Per the system specs, this requires slightly more than 29GB of RAM (thank goodness I have 32).