How to identify hub genes in Cytoscape from a WGCNA output?
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22 days ago
pavelasquezv ▴ 50

Hi all,

How to calculate hub genes in Cytoscape from a WGCNA output? I need to identify hub genes from a WGCNA output file.

This is the output file from WGCINA:

All the best!

Alex

wgcna cytoscape • 266 views
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21 days ago
subhiksha ▴ 30

Load your data into cytoscape. Use the module assignment information to create a network where nodes represent genes and edges represent co-expression relationships within modules. calculate the network stats and from which you can identify hub genes.

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