How to get genes in a gene set in msigdb?
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6 weeks ago
Chris ▴ 260

Hi Biostars,

I tried to find genes in a gene set in msigdb but didn't know how. Would you please help? Thank you so much!

I figured it out. A gmt file have genes in a gene set.

msigdb • 272 views
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Some details what this all means would help. What did you do, where do you get stuck?

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Hi ATpoint, I read the page of a gene set, googled, search biostars about msigdb, asked chat GPT 4. The page of a gene set has many information but didn't see where they list the genes in that gene set.
Try to add a screenshot to illustrate but I got this:
image:Exceeded the maximum amount of images you can upload.

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