Bed file

Question

[Jeet]

I took a intonic alteration for a gene form HMDS and found how many introns will have the alterations. I am generating 2 bed file from a single gene using the name as query. The first file is only exonic coordinates and another is intronic coordinates. I know that bed file is 0 index. While i was checking the number of introns in the bedfile comparing it to the HMDS calculated introns. I am missing some introns in the bed file. My query is why do i see 1 intron less in bed file?

[Pierre Lindenbaum]

Please do not paste screenshots of plain text content, it is counterproductive. You can copy paste the content directly here (using the code formatting option shown below), or use a 'GitHub Gist' if the content volume exceeds allowed length here.

and change the title to something more informative please

and IMHO, your problem is difficult to understand