DADA2 truncLen value
0
0
Entering edit mode
18 months ago
Bioinfo ▴ 20

Hello i have done illumina sequencing and the median of my forward reads is 281 and reverse is 277 , i have plot barplot of reads length in attached pictures

I want to know how can i choose truncLen and what is the optimal truncLen values to use based on these reads lengths in forward and reverse files. Thank you

enter image description here

enter image description here

metabarcoding phyloseq DADA2 illumina • 439 views
ADD COMMENT

Login before adding your answer.

Traffic: 3659 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6