Entering edit mode
26 days ago
pairedttest
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10
Hi there
I am currently working on building a tool to detect STRs in fastq files. I want to generate a dummy fastq file with a known number of 4bp repeats so that I can see if the tool actually works. what is the best way of doing this? I was thinking of just copy-pasting it into the fastq file manually, but that seems less than ideal. does anyone know of any way this could be accomplished?
thanks
You could also get real data referenced in this publications (and others noted); https://pubmed.ncbi.nlm.nih.gov/26722765/ and https://www.frontiersin.org/articles/10.3389/fmolb.2023.1093519/full