How to process Bulk WES data?
0
0
Entering edit mode
5 weeks ago
wyuan37 • 0

I am new to BULK data and I am wondering how is this different from process scDNA-seq data. Does anyone know a pipeline for that? Normally, the scDNA-seq process starts with the alignment, coordination sort, mark duplication, and removal of those. Can I use the same pipeline for processing the Bulk WES data?

WES WGS • 209 views
ADD COMMENT
0
Entering edit mode

You could use sarek (nf-core's exome pipeline) if you don't want to customize or reinvent : https://nf-co.re/sarek/3.4.2

ADD REPLY

Login before adding your answer.

Traffic: 1418 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6