Question

Generate GVF file from VCF file

2

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10.8 years ago

win ▴ 990

I have a VCF file and I want to generate gVCF file from that. http://blog.kokocinski.net/index.php/gvf-format?blog=2

Does anyone know of a converter that convert a VCF file into a GVF file?

Thanks

VCF • 4.2k views

ADD COMMENT • link updated 16 months ago by Ram 45k • written 10.8 years ago by win ▴ 990

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Do you want a GVF or a gVCF? it isn't clear?

ADD REPLY • link updated 3.6 years ago by Ram 45k • written 10.8 years ago by Zev.Kronenberg 12k

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GVF (not a gVCF)

ADD REPLY • link updated 3.6 years ago by Ram 45k • written 10.8 years ago by win ▴ 990

Ram · Answer 1 · 2015-01-07

3

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10.8 years ago

Zev.Kronenberg 12k

ADD COMMENT • link updated 3.6 years ago by Ram 45k • written 10.8 years ago by Zev.Kronenberg 12k

Ram · Answer 2 · 2023-01-24

2

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2.8 years ago

Alireza ▴ 30

Also, The following script works well for this purpose.

ADD COMMENT • link 2.8 years ago by Alireza ▴ 30

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This script does the opposite of what this post is looking for. Do you have any suggestions for converting VCF to GVF?

ADD REPLY • link updated 16 months ago by Ram 45k • written 16 months ago by Brent • 0