Clustering single-cell CNV data
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8 days ago

I have ran infercnv on a large single-cell dataset of over 300,000 cells. I've collapsed the resulting ratios into a single object but it's prohibitively large for using something like hierarchical clustering. Can anyone recommend a decent approach to clustering the data, or even a better approach to dealing with the output of something like infercnv?

R clustering infercnv CNV scRNA • 113 views
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