ChromHMM bed file annotation

Question

[sk_24]

I used chromHMM to get different states/segments. My output file is the bed file. I want to annotate it and see which genes lie in a particular state based on the distance from TSS. How can it be done?

[GenoMax]

By bedtools intersect (https://bedtools.readthedocs.io/en/latest/content/tools/intersect.html ) with a second BED that contains the relevant annotations.

[sk_24]

I want to get the genes which fall in these segments, my segments are active promoter regions and I need the genes whose promoters fall in these active promoter regions