Question: Locate Gsd File Given Gse
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gravatar for QVINTVS_FABIVS_MAXIMVS
5.9 years ago by
USA SoCal
QVINTVS_FABIVS_MAXIMVS2.3k wrote:

I have gene expression data in the form of GSE files that I downloaded from the GEO

I'm working through a tutorial for a similar experiment and it calls for the GSD id, but I cannot find the GSD file for my current experiment.

Any insight is appreciated.

array geo • 1.5k views
ADD COMMENTlink modified 5.9 years ago by Neilfws48k • written 5.9 years ago by QVINTVS_FABIVS_MAXIMVS2.3k
0
gravatar for Neilfws
5.9 years ago by
Neilfws48k
Sydney, Australia
Neilfws48k wrote:

There is no such thing as a GSD ID in GEO. However, there is a GDS. Please read the documentation.

A GDS is a GEO DataSet. It is a human-curated record and not all experiments have one. Where there is no GDS, you work with the Series (GSE).

ADD COMMENTlink written 5.9 years ago by Neilfws48k
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