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2
votes
1
reply
5.7k
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Answer: A: Visualizing CNV data based from bed or bedgraph format
6.7 years ago by bernatgel ★ 3.4k
3
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1
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5.4k
views
Answer: A: Plotting overlapping genomic segments in R
6.7 years ago by bernatgel ★ 3.4k
2
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1
reply
3.5k
views
Comment: C: How to do survival analysis?
6.7 years ago by bernatgel ★ 3.4k
0
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0
replies
3.0k
views
Comment: C: Cannot identify software used to make image
6.7 years ago by bernatgel ★ 3.4k
7
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2
replies
3.0k
views
Answer: A: Cannot identify software used to make image
6.7 years ago by bernatgel ★ 3.4k
7
votes
0
replies
23k
views
Answer: A: convert bed file to GRangeList object
6.7 years ago by bernatgel ★ 3.4k
1
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0
replies
5.7k
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Comment: C: Visualizing CNV data based from bed or bedgraph format
6.8 years ago by bernatgel ★ 3.4k
3
votes
0
replies
4.6k
views
Answer: A: R, how to retrieve the genes associated to a VCF file?
6.8 years ago by bernatgel ★ 3.4k
0
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0
replies
3.0k
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Comment: C: Randomly sample motifs from reference sequence
6.8 years ago by bernatgel ★ 3.4k
1
vote
1
reply
3.0k
views
Answer: A: Randomly sample motifs from reference sequence
6.8 years ago by bernatgel ★ 3.4k
5
votes
0
replies
4.9k
views
Answer: A: Visualize multiple GFF files
6.8 years ago by bernatgel ★ 3.4k
1
vote
0
replies
1.6k
views
Answer: A: How to find true mutations in tumor by removing the background from matched samp
6.9 years ago by bernatgel ★ 3.4k
1
vote
0
replies
6.4k
views
Comment: C: Assembly conversion of large BED files
6.9 years ago by bernatgel ★ 3.4k
2
votes
1
reply
6.4k
views
Answer: C: Assembly conversion of large BED files
6.9 years ago by bernatgel ★ 3.4k
1
vote
0
replies
6.3k
views
Comment: C: Extracting Flanking Regions across TSS using R scripts
6.9 years ago by bernatgel ★ 3.4k
1
vote
1
reply
6.3k
views
Comment: C: Extracting Flanking Regions across TSS using R scripts
6.9 years ago by bernatgel ★ 3.4k
4
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1
reply
6.3k
views
Answer: A: Extracting Flanking Regions across TSS using R scripts
6.9 years ago by bernatgel ★ 3.4k
3
votes
1
reply
4.3k
views
Answer: A: Plot local ancestry on chromosome
6.9 years ago by bernatgel ★ 3.4k
3
votes
1
reply
21k
views
Answer: C: How do I subset a GRanges on chromosome, region and strand?
6.9 years ago by bernatgel ★ 3.4k
1
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0
replies
1.9k
views
Answer: A: Pulling out interval adjoining regions
6.9 years ago by bernatgel ★ 3.4k
5
votes
1
reply
3.9k
views
Answer: A: Visualization tool integrating point mutations, copy number alterations, and str
7.0 years ago by bernatgel ★ 3.4k
0
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0
replies
1.8k
views
Comment: C: How to take reads from WGS fastq files in order to map it with Exome?
7.1 years ago by bernatgel ★ 3.4k
2
votes
0
replies
4.2k
views
Answer: A: How to convert mutation position from gene coordinate to genome coordinate?
7.1 years ago by bernatgel ★ 3.4k
1
vote
0
replies
6.9k
views
Answer: A: Need help with R script to edit x-axis of snp density plot
7.1 years ago by bernatgel ★ 3.4k
0
votes
0
replies
1.3k
views
Answer: A: Simulated CNVs maintaining size
7.2 years ago by bernatgel ★ 3.4k
0
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0
replies
3.3k
views
Comment: C: Systems administrator of bioinformatics linux systems at IGTP, Barcelona
7.2 years ago by bernatgel ★ 3.4k
0
votes
9
replies
3.3k
views
Job: Systems administrator of bioinformatics linux systems at IGTP, Barcelona
SysAdmin
updated 2.5 years ago by 45k • written 7.3 years ago by ★ 3.4k
0
votes
1
reply
3.3k
views
Comment: C: Systems administrator of bioinformatics linux systems at IGTP, Barcelona
7.2 years ago by bernatgel ★ 3.4k
0
votes
1
reply
3.3k
views
Comment: C: Systems administrator of bioinformatics linux systems at IGTP, Barcelona
7.3 years ago by bernatgel ★ 3.4k
0
votes
1
reply
3.3k
views
Comment: C: Systems administrator of bioinformatics linux systems at IGTP, Barcelona
7.3 years ago by bernatgel ★ 3.4k
0
votes
1
reply
3.3k
views
Comment: C: Systems administrator of bioinformatics linux systems at IGTP, Barcelona
7.3 years ago by bernatgel ★ 3.4k
0
votes
0
replies
11k
views
Answer: A: Using Circos plot to visualize RNA-seq data
7.3 years ago by bernatgel ★ 3.4k
0
votes
1
reply
2.9k
views
Answer: A: visualization of the translocations on the vertical scale
7.3 years ago by bernatgel ★ 3.4k
21
votes
2
replies
9.6k
views
Tutorial: Creating a karyotype plot with genes using karyoploteR
karyoploteR visualization R genome
updated 2.5 years ago by 45k • written 8.0 years ago by ★ 3.4k
2
votes
0
replies
7.0k
views
Comment: C: How to determine the surface markers in a gene list
7.4 years ago by bernatgel ★ 3.4k
2
votes
0
replies
1.8k
views
Answer: A: plot genome using RCircos
7.4 years ago by bernatgel ★ 3.4k
1
vote
0
replies
1.7k
views
Comment: C: A weird variant call from VarScan2 mpileup2snp
7.5 years ago by bernatgel ★ 3.4k
0
votes
0
replies
15k
views
Comment: C: karyoploteR: uncircle your genomes
7.5 years ago by bernatgel ★ 3.4k
0
votes
0
replies
2.5k
views
Answer: A: kpPlotLinks function not working in karyoplotR
7.5 years ago by bernatgel ★ 3.4k
4
votes
0
replies
11k
views
Answer: A: Association between bed files - statistical significance
7.5 years ago by bernatgel ★ 3.4k
0
votes
0
replies
2.5k
views
Answer: A: Is there an available tool to visualize multiple "types" of ChIP-seq peaks on a
7.6 years ago by bernatgel ★ 3.4k
0
votes
1
reply
4.4k
views
Comment: C: Tools for visualization of CNVs called by XHMM
7.6 years ago by bernatgel ★ 3.4k
0
votes
1
reply
4.4k
views
Comment: C: Tools for visualization of CNVs called by XHMM
7.6 years ago by bernatgel ★ 3.4k
1
vote
1
reply
4.4k
views
Answer: A: Tools for visualization of CNVs called by XHMM
7.6 years ago by bernatgel ★ 3.4k
3
votes
0
replies
15k
views
Answer: A: Getting a bash pipeline to output non-zero exit code when a step fails
7.7 years ago by bernatgel ★ 3.4k
0
votes
0
replies
1.8k
views
Comment: C: Tools for visualizing genome
8.0 years ago by bernatgel ★ 3.4k
15
votes
3
replies
22k
views
Answer: A: Creating chromosome karyotype plot with R and ggplot2
8.0 years ago by bernatgel ★ 3.4k
0
votes
0
replies
22k
views
Comment: C: Creating chromosome karyotype plot with R and ggplot2
8.0 years ago by bernatgel ★ 3.4k
1
vote
0
replies
3.8k
views
Answer: Answer: Drawing yeast chromosome ideograms with data
updated 2.9 years ago by 45k • written 8.0 years ago by ★ 3.4k
0
votes
0
replies
3.8k
views
Comment: C: How to name the genome in karyoploteR ?
8.0 years ago by bernatgel ★ 3.4k
190 results • Page 3 of 4
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