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Answer: Answer: Perform Plink association tests on a genetype file with one allele
2.7 years ago by LChart 5.2k
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0
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886
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Answer: Answer: overlay ggplot graphs like those merging channels in imagej
2.7 years ago by LChart 5.2k
1
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0
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833
views
Comment: Comment: Obtain information from a filtered VCF file
2.7 years ago by LChart 5.2k
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1
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13k
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Comment: Comment: making a BIGWIG from BAM file
2.7 years ago by LChart 5.2k
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1
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13k
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Answer: Answer: making a BIGWIG from BAM file
2.7 years ago by LChart 5.2k
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1
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15k
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Comment: Comment: conda create env using .yml file leads to dependency conflicts
2.7 years ago by LChart 5.2k
1
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1
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814
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Answer: Answer: Filter out pct.2 <0.5
2.7 years ago by LChart 5.2k
1
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0
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1.5k
views
Answer: Answer: MACS to Signac
2.7 years ago by LChart 5.2k
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1
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1.3k
views
Comment: Comment: R error
2.7 years ago by LChart 5.2k
1
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0
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988
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Comment: Comment: Bioinformatics recursion practical applications
2.7 years ago by LChart 5.2k
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1
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4.6k
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Comment: Comment: Can't liftover vcf file from hg19 to hg38
updated 2.7 years ago by 45k • written 2.7 years ago by 5.2k
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0
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986
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Comment: Comment: Can you apply Base Score Recalibration in parallel?
2.8 years ago by LChart 5.2k
2
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1
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1.9k
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Comment: Comment: Reads are marked as full of mismatches in IGV, but cigar string shows full lengt
2.8 years ago by LChart 5.2k
2
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1
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1.6k
views
Answer: Answer: Plotting Correlation matrix
2.8 years ago by LChart 5.2k
1
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0
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4.2k
views
Comment: Comment: BULK mRNA-seq with UMIs. Do I need to normalize by gene length?
2.8 years ago by LChart 5.2k
0
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0
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673
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Answer: Answer: Filtering methods for samtools or GATK
2.8 years ago by LChart 5.2k
0
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1
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4.2k
views
Comment: Comment: BULK mRNA-seq with UMIs. Do I need to normalize by gene length?
2.8 years ago by LChart 5.2k
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2
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2.9k
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Comment: Comment: Downloading NT chunks from NCBI and creating a BLAST database
2.8 years ago by LChart 5.2k
1
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0
replies
1.5k
views
Comment: Comment: Sample size, GxE GWAS
2.8 years ago by LChart 5.2k
2
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1
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1.4k
views
Answer: Answer: Is there a way to download the KEGG output (gene - KO) directly?
2.8 years ago by LChart 5.2k
0
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1
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1.4k
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Answer: Answer: gwas summary statistics
2.8 years ago by LChart 5.2k
3
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0
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1.0k
views
Answer: Answer: TPM or TMM for gene expression correlation and distribution
2.8 years ago by LChart 5.2k
2
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0
replies
1.8k
views
Comment: Comment: GWAS: population covariates - should the x-chromosome in addition to autosomes?
2.8 years ago by LChart 5.2k
3
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1
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1.8k
views
Answer: Answer: GWAS: population covariates - should the x-chromosome in addition to autosomes?
2.8 years ago by LChart 5.2k
1
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1
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1.1k
views
Comment: Comment: Is there any recommended RNAseq ranking for DEGs/driver genes
2.8 years ago by LChart 5.2k
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0
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2.0k
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Comment: Comment: WGCNA: problem with how to avoid huge modules
2.8 years ago by LChart 5.2k
1
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0
replies
1.5k
views
Comment: Comment: In GWAS what is the point of regressing a quantitative phenotype on covariates f
2.8 years ago by LChart 5.2k
0
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2
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2.0k
views
Comment: Comment: WGCNA: problem with how to avoid huge modules
2.8 years ago by LChart 5.2k
1
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0
replies
2.9k
views
Comment: Comment: UMAP Cluster separation
2.8 years ago by LChart 5.2k
0
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1
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2.9k
views
Comment: Comment: UMAP Cluster separation
2.8 years ago by LChart 5.2k
1
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1
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2.0k
views
Comment: Comment: WGCNA: problem with how to avoid huge modules
2.8 years ago by LChart 5.2k
1
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1
reply
2.8k
views
Answer: Answer: Why is the fraction of mRNA transcripts captured per cell so low?
2.9 years ago by LChart 5.2k
2
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1
reply
1.9k
views
Comment: Comment: HaplotypeCaller: GVCF-Mode or VCF for variant calling of single sample?
2.9 years ago by LChart 5.2k
0
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0
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1.1k
views
Comment: Comment: Is the RNA- sequencing quality too bad for analysis?
2.9 years ago by LChart 5.2k
0
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0
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1.3k
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Comment: Comment: The Biostar Herald for Tuesday, December 27, 2022
2.9 years ago by LChart 5.2k
2
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1
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1.9k
views
Comment: Comment: Mutect2 read orientation bias filter effect on Somatic variant calling
2.9 years ago by LChart 5.2k
1
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0
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3.3k
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Comment: Comment: Interesting discrepancy between NGS (Illumina) and Sanger seq.
2.9 years ago by LChart 5.2k
1
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2
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3.3k
views
Comment: Comment: Interesting discrepancy between NGS (Illumina) and Sanger seq.
2.9 years ago by LChart 5.2k
0
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1
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1.6k
views
Comment: Comment: Redirect Stdout From twoBitToFa in Bash
2.9 years ago by LChart 5.2k
1
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0
replies
1.2k
views
Comment: Comment: scRNA seq with seurat: how do I add a column to the metadata?
2.9 years ago by LChart 5.2k
1
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0
replies
1.1k
views
Answer: Answer: Can variant exist in VCF even if no samples have that variant
2.9 years ago by LChart 5.2k
2
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1
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1.9k
views
Answer: Answer: How to make scanpy read gene names to plot instead of read sequences
2.9 years ago by LChart 5.2k
0
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1
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1.2k
views
Comment: Comment: Why can't I quantify the peaks (scATAC)?
2.9 years ago by LChart 5.2k
0
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1
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1.9k
views
Comment: Comment: add 1/2 to fastq header
2.9 years ago by LChart 5.2k
1
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1
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1.0k
views
Comment: Comment: Genotyping
2.9 years ago by LChart 5.2k
1
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0
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1.9k
views
Comment: Comment: add 1/2 to fastq header
2.9 years ago by LChart 5.2k
0
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0
replies
1.1k
views
Comment: Comment: Problem in annotation function for visualization of points in PCA plot
2.9 years ago by LChart 5.2k
0
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0
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4.6k
views
Comment: Comment: Automated way to pull representative/RefSeq genome using full species name?
2.9 years ago by LChart 5.2k
0
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1
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1.3k
views
Comment: Comment: SNPs in LD with fine-mapped SNPs, are they equally likely to be causative?
2.9 years ago by LChart 5.2k
0
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1
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4.6k
views
Comment: Comment: Automated way to pull representative/RefSeq genome using full species name?
2.9 years ago by LChart 5.2k
635 results • Page 9 of 13
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