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Answer: Answer: Alternatives to WGCNA
19 hours ago by LChart 4.9k
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327
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Answer: Answer: I have doubts regarding conducting meta-analysis of differentially expressed gen
14 days ago by LChart 4.9k
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308
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Answer: Answer: How to make amazing UMAP to spatialPlot GIF
8 weeks ago by LChart 4.9k
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309
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Answer: Answer: How to compute DS (diploid dosage) from HDS (haploid dosage) in VCF?
9 weeks ago by LChart 4.9k
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1.5k
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Answer: Answer: How to use harmony with scanpy?
3 months ago by LChart 4.9k
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563
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Answer: Answer: Dimensionality reduction using RNA and protein expression
3 months ago by LChart 4.9k
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754
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Answer: Answer: Why don't mRNA levels measure protein synthesis rates?
3 months ago by LChart 4.9k
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353
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Answer: Answer: Integration of Cut&Tag to ATACseq and RNAseq data - impact of a mutation
3 months ago by LChart 4.9k
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572
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Answer: Answer: Flattened TSS enrichment x unique fragments from scATAC experiment
3 months ago by LChart 4.9k
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1.3k
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Answer: Answer: cellxgene DNA Methylation data
4 months ago by LChart 4.9k
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848
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Answer: Answer: Create the correct contrast in limma when want to combine 2 or more groups
4 months ago by LChart 4.9k
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685
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Answer: Answer: Unexpected results: Conservation of cCREs
4 months ago by LChart 4.9k
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1.1k
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Answer: Answer: high IgG background
4 months ago by LChart 4.9k
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866
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Answer: Answer: Seurat Mito Prefix Removed from Features
5 months ago by LChart 4.9k
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472
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Answer: Answer: How to remove pseudo genes from a list
5 months ago by LChart 4.9k
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571
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Answer: Answer: Spatial correlation between two continuous variables
5 months ago by LChart 4.9k
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648
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Answer: Answer: How to determine intra-run and inter-run repeatability in statistically sound ma
5 months ago by LChart 4.9k
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458
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Answer: Answer: Single cell cluster naming
5 months ago by LChart 4.9k
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596
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Answer: Answer: Generating multiple species reference for CellRanger
5 months ago by LChart 4.9k
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1.1k
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Answer: Answer: Converting gene_ids from GTF file to common gene symbols
5 months ago by LChart 4.9k
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788
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Answer: Answer: Logistic regression to separate 2 conditions
5 months ago by LChart 4.9k
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576
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Answer: Answer: scATAC-seq (Sinac)
5 months ago by LChart 4.9k
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707
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Answer: Answer: Best way of visualzing RNA-seq bam files
6 months ago by LChart 4.9k
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958
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Answer: Answer: [ChIPSeq] Multiple Peaks at Cross Correlation Analysis
6 months ago by LChart 4.9k
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477
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Answer: Answer: [RNASeq] Excluding samples that cluster differently in PCA plot
6 months ago by LChart 4.9k
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562
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Answer: Answer: GWAS from direct samples... is imputation necessary?
6 months ago by LChart 4.9k
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392
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Answer: Answer: WGCNA unpaired trait/expression data
6 months ago by LChart 4.9k
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1.1k
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Answer: Answer: What is the best backgrowun gene list to choose for GSEA, ORA, and for KOBAS
6 months ago by LChart 4.9k
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451
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Answer: Answer: How to normalise the RNAseq data without spike in?
6 months ago by LChart 4.9k
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782
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Answer: Answer: Emphasizing biological effect of candidate variants used in polygenic risk score
6 months ago by LChart 4.9k
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532
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Answer: Answer: GATK BaseQualityRecalibrator
6 months ago by LChart 4.9k
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527
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Answer: Answer: Does BWA-MEM 2 account for overlapping reads within the paired end data?
6 months ago by LChart 4.9k
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675
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Answer: Answer: Issues with pGIG : Negative probability and unexpected P value order
6 months ago by LChart 4.9k
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679
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Answer: Answer: Cluster regions based on similar/dissimilar ChIP-seq signal profile across the w
7 months ago by LChart 4.9k
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887
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Answer: Answer: Using DNA Methylation Data as Input for ChromHMM
7 months ago by LChart 4.9k
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1.0k
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Answer: Answer: WGCNA package.
7 months ago by LChart 4.9k
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705
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Answer: Answer: Cross-strand correlation for paired-end ChIP-seq data
7 months ago by LChart 4.9k
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1.0k
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Answer: Answer: Issue understanding ATAC-seq PCA
7 months ago by LChart 4.9k
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619
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Answer: Answer: Limma covariates treatment is changing my significance results
8 months ago by LChart 4.9k
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762
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Answer: Answer: WGCNA: Problem with selecting soft threshold below R^2 0.8
8 months ago by LChart 4.9k
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571
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Answer: Answer: EnhancerAtlas
8 months ago by LChart 4.9k
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488
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Answer: Answer: Identifying statistically significant clusters between two populations of variab
8 months ago by LChart 4.9k
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1.2k
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Answer: Answer: Integrate several multiome objects
8 months ago by LChart 4.9k
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1.2k
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Answer: Answer: Integrate several multiome objects
8 months ago by LChart 4.9k
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1
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1.5k
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Answer: Answer: Is it Necessary to Use Raw Data for SCTransform When Regressing Out Cell Cycle G
8 months ago by LChart 4.9k
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0
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973
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Answer: Answer: Best Way to Assemble DNA Sequencing Data
8 months ago by LChart 4.9k
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556
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Answer: Answer: Using Ensembl Gene IDs for Ontology Analysis
8 months ago by LChart 4.9k
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3.0k
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Answer: Answer: Is "training", fine tuning, or overfitting on "external independent validation d
9 months ago by LChart 4.9k
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1.1k
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Answer: Answer: If TPM is not comparable across cohorts, can it be used as the input for ML mode
9 months ago by LChart 4.9k
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1.0k
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Answer: Answer: Clarification on WGCNA Module-Trait Correlations, Interpretation, and Functional
9 months ago by LChart 4.9k
290 results • Page 1 of 6
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