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6
votes
9
replies
6.8k
views
Keeping paired reads together when sorting BAM file by name
alignment next-gen RNA-Seq
updated 3.1 years ago by 45k • written 10.3 years ago by 7.1k
4
votes
12
replies
4.2k
views
GATB de Bruijn graph
sequence gatb
updated 2.6 years ago by 45k • written 9.9 years ago by 7.1k
5
votes
2
replies
3.9k
views
Comparing assembled transcripts against a reference
Assembly RNA-Seq
updated 3.0 years ago by 45k • written 10.2 years ago by 7.1k
5
votes
11
replies
4.5k
views
Perplexing Bowtie 2 results
RNA-Seq
updated 3.2 years ago by 45k • written 10.5 years ago by 7.1k
3
votes
4
replies
4.0k
views
"Valid" names for paired-end reads
next-gen-sequencing RNA-Seq
updated 17 months ago by ▴ 140 • written 10.5 years ago by 7.1k
1
vote
9
replies
3.1k
views
"Un-Projecting" genome alignments onto a transcriptome
RNA-Seq alignment genome
updated 10 months ago by ▴ 90 • written 10.6 years ago by 7.1k
15
votes
15
replies
18k
views
Fragment Size: TLEN vs. isize
sequencing alignment next-gen
updated 3.5 years ago by 45k • written 10.9 years ago by 7.1k
7
votes
0
replies
3.1k
views
Suffix Array Vs. Compressed Suffix Array Vs. Bwt Search
search alignment
11.3 years ago by Rob 7.1k
1
vote
3
replies
2.7k
views
Use Rlsim With Empirical (Input) Expression Levels
expression rna-seq simulation
updated 11.5 years ago by ★ 1.7k • written 11.5 years ago by 7.1k
12
votes
9
replies
4.6k
views
6 follow
Sequence Evolution Library In Java
java python evolution model
updated 14.3 years ago by ▴ 10 • written 14.3 years ago by 7.1k
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