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How to find plasmid genes or associated with plasmid from CARD RGI
WGS
updated 6 months ago by
Ram
43k • written 6 months ago by
Mustafa
• 0
0
votes
1
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942
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Comment:
Comment: Found some plasmids in my sequence. IS there any tool or process by which i can
8 months ago by
Mustafa
• 0
0
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0
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942
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Comment:
Comment: Found some plasmids in my sequence. IS there any tool or process by which i can
8 months ago by
Mustafa
• 0
1
vote
6
replies
942
views
Found some plasmids in my sequence. IS there any tool or process by which i can find whether there are any AMR genes within those sequence?
WGS
updated 8 months ago by
Ram
43k • written 8 months ago by
Mustafa
• 0
0
votes
0
replies
305
views
Interpretation of Virulence score
WGS
updated 8 months ago by
Ram
43k • written 8 months ago by
Mustafa
• 0
0
votes
0
replies
272
views
I found 4 CRISPR seq and 1 CAS protein. How can I interpret whether this is a functional CRISPR?
WGS
updated 8 months ago by
Ram
43k • written 8 months ago by
Mustafa
• 0
0
votes
0
replies
542
views
Comment:
Comment: I have a FASTA file. I want to extract from some sequence using seqtk. What shou
9 months ago by
Mustafa
• 0
0
votes
0
replies
542
views
Comment:
Comment: I have a FASTA file. I want to extract from some sequence using seqtk. What shou
9 months ago by
Mustafa
• 0
2
votes
4
replies
542
views
I have a FASTA file. I want to extract from some sequence using seqtk. What should be the command for it?
WGS
9 months ago by
Mustafa
• 0
0
votes
0
replies
661
views
Comment:
Comment: I have one fasta file of a bacteria. Can i use to create a phylogenetic tree?
11 months ago by
Mustafa
• 0
1
vote
2
replies
661
views
I have one fasta file of a bacteria. Can i use to create a phylogenetic tree?
WGS
updated 11 months ago by
Ram
43k • written 11 months ago by
Mustafa
• 0
0
votes
1
reply
432
views
Identifying whether a sequence is Novel or not
Novel-sequence
WGS
updated 15 months ago by
Ram
43k • written 15 months ago by
Mustafa
• 0
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