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Comment:
C: How realible samtools/ bam-readcount /igvtools /pysamstats for finding deletions
6.7 years ago by
Chris Miller
22k
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1
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3.1k
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Comment:
C: Tumor purity estimation by allele frequency of COSMIC identified somatic mutatio
6.7 years ago by
Chris Miller
22k
0
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1
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15k
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Comment:
C: Unable to access jarfile trimmomatic-0.35
6.7 years ago by
Chris Miller
22k
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1
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1.5k
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Comment:
C: SomaticSniper: Depth of reads supporting variant(s) in normal =0
6.7 years ago by
Chris Miller
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1.9k
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Comment:
C: Bioinformatics position at Washington University
6.9 years ago by
Chris Miller
22k
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4.0k
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Comment:
C: The meaning of VAF and LOH in sciclone
6.9 years ago by
Chris Miller
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2
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3.4k
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Comment:
C: I have a problem when I am using the bedGraphToBigWig.
6.9 years ago by
Chris Miller
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3.2k
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Comment:
C: Using ReadDepth for non-human data
6.9 years ago by
Chris Miller
22k
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1.0k
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Comment:
C: how can i install breakdancer in ubunto 15.10?
6.9 years ago by
Chris Miller
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2.7k
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Comment:
C: How can I make VEP recognize header lines in my VCF?
7.0 years ago by
Chris Miller
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2.6k
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Comment:
C: Bam-readcount output empty from certain regions (RNA seq bams)
7.1 years ago by
Chris Miller
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17k
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Comment:
C: What is Copy Number Variation(CNV) and Alteration(CNA)
7.1 years ago by
Chris Miller
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17k
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Comment:
C: What is Copy Number Variation(CNV) and Alteration(CNA)
7.1 years ago by
Chris Miller
22k
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2.0k
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Comment:
C: bam-readcount error bam_header_read
7.2 years ago by
Chris Miller
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3.5k
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Comment:
C: Whole Genome Sequences somatic MAF files at TCGA
7.3 years ago by
Chris Miller
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10.0k
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Comment:
C: fastq.gz Error: Not in gzip format
7.4 years ago by
Chris Miller
22k
0
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1
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10.0k
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Comment:
C: fastq.gz Error: Not in gzip format
7.4 years ago by
Chris Miller
22k
2
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3.6k
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Comment:
C: How to do INDEL alignment
7.4 years ago by
Chris Miller
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3.7k
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Comment:
C: BAM to Fastq using picard and others from a desired regions
7.4 years ago by
Chris Miller
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3.7k
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Comment:
C: BAM to Fastq using picard and others from a desired regions
7.4 years ago by
Chris Miller
22k
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1
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2.0k
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Comment:
C: How to cite the "BED 12" format ?
7.4 years ago by
Chris Miller
22k
1
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1
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3.1k
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Comment:
C: What is the coverage when allele frequency is < 1?
7.5 years ago by
Chris Miller
22k
1
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1
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3.1k
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Comment:
C: What is the coverage when allele frequency is < 1?
7.5 years ago by
Chris Miller
22k
1
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0
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3.9k
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Comment:
C: samtools sort generates over millions of files
7.5 years ago by
Chris Miller
22k
1
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0
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3.1k
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Comment:
C: What is the coverage when allele frequency is < 1?
7.5 years ago by
Chris Miller
22k
1
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1
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5.4k
views
Comment:
C: How to convert bam-readcount output to BED-VAF format
7.5 years ago by
Chris Miller
22k
0
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0
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4.2k
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Comment:
C: sciClone input vaf file?
7.5 years ago by
Chris Miller
22k
1
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1
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4.2k
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Comment:
C: sciClone input vaf file?
7.5 years ago by
Chris Miller
22k
0
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1.7k
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Comment:
C: Genome Music for Enhancers and binding sites
7.5 years ago by
Chris Miller
22k
0
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0
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3.5k
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Comment:
C: sciClone:input data wrong
7.6 years ago by
Chris Miller
22k
0
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1
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3.5k
views
Comment:
C: sciClone:input data wrong
7.6 years ago by
Chris Miller
22k
1
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0
replies
3.0k
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Comment:
C: Only one cluster in multiple tumor phylogeny samples
7.6 years ago by
Chris Miller
22k
0
votes
1
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5.9k
views
Comment:
C: Identifying the tumor clones and subclones with VAF from VarScan2
7.6 years ago by
Chris Miller
22k
0
votes
0
replies
4.6k
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Comment:
C: Sciclone on exome sequencing data
7.6 years ago by
Chris Miller
22k
0
votes
1
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5.9k
views
Comment:
C: Identifying the tumor clones and subclones with VAF from VarScan2
7.6 years ago by
Chris Miller
22k
0
votes
1
reply
1.9k
views
Comment:
C: SciClone: Extra Cluster When Recreating Figure 3
7.6 years ago by
Chris Miller
22k
0
votes
0
replies
32k
views
Comment:
C: Calculate The Frequency Of Nucleotides At Each Position In An Mpileup File
7.6 years ago by
Chris Miller
22k
0
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0
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5.4k
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Comment:
C: Clonal Evolution Plot (figure 3d)
7.6 years ago by
Chris Miller
22k
0
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0
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4.6k
views
Comment:
C: Sciclone on exome sequencing data
7.6 years ago by
Chris Miller
22k
0
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1
reply
3.0k
views
Comment:
C: Only one cluster in multiple tumor phylogeny samples
7.6 years ago by
Chris Miller
22k
0
votes
2
replies
4.6k
views
Comment:
C: Sciclone on exome sequencing data
7.6 years ago by
Chris Miller
22k
0
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1
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4.6k
views
Comment:
C: Sciclone on exome sequencing data
7.6 years ago by
Chris Miller
22k
0
votes
0
replies
4.6k
views
Comment:
C: Sciclone on exome sequencing data
7.7 years ago by
Chris Miller
22k
0
votes
0
replies
3.9k
views
Comment:
C: Question about sciClone example data and test script
7.8 years ago by
Chris Miller
22k
0
votes
0
replies
3.9k
views
Comment:
C: Question about sciClone example data and test script
7.8 years ago by
Chris Miller
22k
0
votes
2
replies
3.9k
views
Comment:
C: Question about sciClone example data and test script
7.9 years ago by
Chris Miller
22k
0
votes
1
reply
3.9k
views
Comment:
C: Question about sciClone example data and test script
7.9 years ago by
Chris Miller
22k
0
votes
1
reply
3.9k
views
Comment:
C: Question about sciClone example data and test script
7.9 years ago by
Chris Miller
22k
0
votes
0
replies
3.2k
views
Comment:
C: Using ReadDepth for non-human data
7.9 years ago by
Chris Miller
22k
0
votes
1
reply
3.2k
views
Comment:
C: Using ReadDepth for non-human data
7.9 years ago by
Chris Miller
22k
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