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Comment: Comment: where to obtain hg19 reference transcriptome in gencode
2.3 years ago by Josh ▴ 20
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2
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where to obtain hg19 reference transcriptome in gencode
hg19 salmon gencode
2.3 years ago by Josh ▴ 20
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3.9k
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Comment: Comment: Obtaining TPM values from STAR alignment and counts with featurecounts using R's
2.4 years ago by Josh ▴ 20
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6
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3.9k
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Obtaining TPM values from STAR alignment and counts with featurecounts using R's tidyverse syntax (dplyr and tidyr)
R rnaseq tidyverse tpm
2.4 years ago by Josh ▴ 20
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How to get the counts matrix correctly for DESeq2 from the counts table resulting from nextflow rnaseq pipeline
salmon rnaseq DESeq2
updated 2.7 years ago by ★ 2.1k • written 2.7 years ago by ▴ 20
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2.2k
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Question about length values given by salmon and tximport
salmon tximport RNA-seq
updated 2.7 years ago by 45k • written 2.7 years ago by ▴ 20
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2.3k
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Comment: Comment: Questions about supplementary file contents of a GEO dataset
2.8 years ago by Josh ▴ 20
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3
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2.3k
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Questions about supplementary file contents of a GEO dataset
GEO
2.8 years ago by Josh ▴ 20
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Comment: Comment: Doubt on annotation of ensembl ids in biomart using R
2.8 years ago by Josh ▴ 20
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2
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1.3k
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Doubt on annotation of ensembl ids in biomart using R
ensembl
2.8 years ago by Josh ▴ 20
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