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3
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655
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Answer: Answer: AF column in VCF file
19 months ago by iraun 6.2k
1
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0
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553
views
Answer: Answer: using sam files for feature counts, and confusion about strandedness
19 months ago by iraun 6.2k
3
votes
1
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835
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Answer: Answer: Split multiple annotations from SnpEff
19 months ago by iraun 6.2k
0
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0
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792
views
Answer: Answer: How can I descending reorder the dots in the scatter plot in ggplot based on the
19 months ago by iraun 6.2k
2
votes
0
replies
558
views
Answer: Answer: Unable to get unaligned files after HISAT2
19 months ago by iraun 6.2k
2
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0
replies
885
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Answer: Answer: how to filter fasta file?
19 months ago by iraun 6.2k
1
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1
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621
views
Answer: Answer: While using GATK BaseRecalibration :No report file is created and i cannot fig
22 months ago by iraun 6.2k
1
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1
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1.6k
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Answer: Answer: GFF3 files
23 months ago by iraun 6.2k
2
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1
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927
views
Answer: Answer: Unable to access error while running docker container for GATK
23 months ago by iraun 6.2k
0
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0
replies
761
views
Answer: Answer: Summarise bases from alignment
23 months ago by iraun 6.2k
1
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0
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938
views
Answer: Answer: What is difference between Bioinformatics and Data Science?
23 months ago by iraun 6.2k
0
votes
2
replies
1.9k
views
Answer: Answer: Editing FASTQ headers
23 months ago by iraun 6.2k
1
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1
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670
views
Answer: Answer: expand varians in a vcf file
23 months ago by iraun 6.2k
1
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0
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560
views
Answer: Answer: bcftools error on freebayes vcfs
23 months ago by iraun 6.2k
2
votes
2
replies
997
views
Answer: Answer: Difference between commands [bowtie2, samtools]
24 months ago by iraun 6.2k
2
votes
1
reply
724
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Answer: Answer: featureCounts results has many psedugenes(ENSG***) together with genes
2.0 years ago by iraun 6.2k
0
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1
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1.1k
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Answer: Answer: bcftools consensus overlapped variant
2.0 years ago by iraun 6.2k
3
votes
1
reply
750
views
Answer: Answer: How to label genes passing the p-value and fold change cut-offs in EnhancedVolca
2.0 years ago by iraun 6.2k
1
vote
2
replies
3.8k
views
Answer: Answer: all variables in design formula must be columns in colData
2.1 years ago by iraun 6.2k
0
votes
1
reply
819
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Answer: Answer: Issue when trying to extract sequences from a genome using bed coordinates and s
2.1 years ago by iraun 6.2k
2
votes
0
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402
views
Answer: Answer: Intronic gVCF
2.1 years ago by iraun 6.2k
0
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0
replies
746
views
Answer: Answer: Tumor cell percentage detection tool
2.1 years ago by iraun 6.2k
2
votes
1
reply
1.8k
views
Answer: Answer: Visualization of Frameshift mutations in IGV using Bam files
2.1 years ago by iraun 6.2k
0
votes
0
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899
views
Answer: Answer: Why some variants doesn't have RS number?
2.1 years ago by iraun 6.2k
3
votes
2
replies
2.2k
views
Answer: Answer: htseq-count error
2.1 years ago by iraun 6.2k
2
votes
0
replies
502
views
Answer: Answer: Spades command for single cultivator
2.1 years ago by iraun 6.2k
0
votes
1
reply
1.8k
views
Answer: Answer: How to perform Allele balance on a VCF file from GATK?
2.1 years ago by iraun 6.2k
1
vote
1
reply
759
views
Answer: Answer: Bash loop one liner
2.1 years ago by iraun 6.2k
1
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0
replies
725
views
Answer: Answer: command
2.1 years ago by iraun 6.2k
0
votes
0
replies
1.3k
views
Answer: A: Quality check of NGS data
3.8 years ago by iraun 6.2k
1
vote
1
reply
3.4k
views
Answer: A: Trinity, longest contigs
updated 4.3 years ago by 43k • written 8.3 years ago by 6.2k
1
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0
replies
1.6k
views
Answer: A: unannotated SNP ids
updated 4.4 years ago by 43k • written 8.3 years ago by 6.2k
0
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1
reply
2.8k
views
Answer: A: encode data for RNAseq, type of library
updated 4.4 years ago by 43k • written 8.4 years ago by 6.2k
2
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1
reply
8.4k
views
Answer: C: how to quickly extract sequence from genome positions
updated 4.4 years ago by 43k • written 8.4 years ago by 6.2k
0
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0
replies
6.1k
views
Answer: A: How to concatenate gene sequence?
updated 4.4 years ago by 43k • written 8.4 years ago by 6.2k
2
votes
1
reply
2.0k
views
Answer: A: [Experimental Design] Is it possible to determine completeness of a genome if yo
updated 4.4 years ago by 43k • written 8.4 years ago by 6.2k
4
votes
1
reply
12k
views
Answer: C: extract columns from file based on header selected from 2nd file
updated 4.4 years ago by 43k • written 8.5 years ago by 6.2k
0
votes
0
replies
1.9k
views
Answer: A: SNP annotation in sequence
updated 4.6 years ago by 43k • written 9.3 years ago by 6.2k
2
votes
0
replies
3.1k
views
Answer: Answer: Taxonomic assignments to metagenomic sequences
updated 2.1 years ago by 43k • written 9.3 years ago by 6.2k
3
votes
2
replies
4.7k
views
Answer: Answer: tophat --library-type option
updated 2.1 years ago by 43k • written 9.4 years ago by 6.2k
9
votes
0
replies
14k
views
Answer: Answer: Beginner for SnpEff
updated 2.1 years ago by 43k • written 9.4 years ago by 6.2k
3
votes
1
reply
2.0k
views
Answer: A: Estimation of carrier of Mendelian disorders.
updated 4.6 years ago by 43k • written 9.5 years ago by 6.2k
3
votes
1
reply
1.9k
views
Answer: A: How to analyze non-Human whole genome re-sequencing data?
updated 4.6 years ago by 43k • written 9.5 years ago by 6.2k
1
vote
0
replies
12k
views
Answer: A: Filter genotype in multi-sample VCF file
updated 4.6 years ago by 43k • written 9.5 years ago by 6.2k
3
votes
2
replies
37k
views
Answer: A: how to remove multiallelic from VCF
updated 5.2 years ago by 43k • written 9.0 years ago by 6.2k
0
votes
1
reply
3.0k
views
Answer: A: Aligning reads to genome together with transcriptome
updated 5.6 years ago by 43k • written 8.2 years ago by 6.2k
2
votes
1
reply
2.3k
views
Answer: A: please help me to be clear about the up and down regulated genes from cuffdiff
updated 5.6 years ago by 43k • written 8.2 years ago by 6.2k
1
vote
0
replies
5.0k
views
Answer: A: RNA seq results as fpkm
updated 5.6 years ago by 43k • written 8.2 years ago by 6.2k
3
votes
1
reply
1.9k
views
Answer: A: bam-readcount : Reference_base is not the base with highest count
7.1 years ago by iraun 6.2k
0
votes
0
replies
1.5k
views
Answer: A: Oncotator Most Recent Version and Data Source
7.2 years ago by iraun 6.2k
181 results • Page 2 of 4
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