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7
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2
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2.9k
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Answer: C: Why is it absolutely necessary to filter a VCF?
7.3 years ago by iraun 6.2k
1
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0
replies
9.7k
views
Answer: A: Grep the first match for each line of a pattern file
7.3 years ago by iraun 6.2k
0
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1
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5.3k
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Answer: A: Bash- Sort a file based on a list in another file
7.3 years ago by iraun 6.2k
1
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1
reply
1.1k
views
Answer: A: attend the sequence length to the sequence name
7.5 years ago by iraun 6.2k
1
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0
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1.9k
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Answer: A: Why longer K-mer is better for de novo assembly of high abundant transcript and
7.5 years ago by iraun 6.2k
1
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3
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5.5k
views
Answer: A: How to decide Kmer size for RNA seq analysis using Trinity
7.9 years ago by iraun 6.2k
0
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0
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5.2k
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Answer: A: parsing a fastq file using biopython
7.9 years ago by iraun 6.2k
1
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0
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4.7k
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Answer: A: extract reads with given size range
7.9 years ago by iraun 6.2k
1
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0
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16k
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Answer: A: fasta - reverse complement sequence
8.0 years ago by iraun 6.2k
2
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2
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6.3k
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Answer: C: rename reads in fastq files
8.1 years ago by iraun 6.2k
5
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2
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22k
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Answer: A: Renaming fasta headers according to a matching name list
8.2 years ago by iraun 6.2k
1
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3
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5.2k
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Answer: A: RSeQC infer_experiment.py results interpretation for cuffdiff and featureCounts
8.3 years ago by iraun 6.2k
0
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0
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2.0k
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Answer: A: wgsim outputs different files
8.3 years ago by iraun 6.2k
3
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0
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7.1k
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Answer: Answer: Identifying discordantly mapped reads
updated 7 months ago by 43k • written 8.6 years ago by 6.2k
1
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0
replies
3.0k
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Answer: A: SICER Fragment size estimation
8.8 years ago by iraun 6.2k
3
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1
reply
2.5k
views
Answer: A: How to create ouput file using perl
8.9 years ago by iraun 6.2k
2
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1
reply
2.8k
views
Answer: Answer: Bedtools intersect a position in a range
updated 16 months ago by 43k • written 8.9 years ago by 6.2k
1
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1
reply
1.3k
views
Answer: Answer: insert weight values in multifasta file
updated 16 months ago by 43k • written 9.0 years ago by 6.2k
2
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1
reply
4.9k
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Answer: Answer: renaming all fasta headers in a file
updated 16 months ago by 43k • written 9.0 years ago by 6.2k
2
votes
1
reply
1.7k
views
Answer: Answer: add a blank line after particular line
updated 2.3 years ago by 43k • written 9.0 years ago by 6.2k
3
votes
2
replies
4.0k
views
Answer: C: warning in R
9.0 years ago by iraun 6.2k
2
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0
replies
1.9k
views
Answer: Answer: samtools variant calling
updated 2.1 years ago by 43k • written 9.0 years ago by 6.2k
3
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1
reply
10k
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Answer: Answer: how to remove adapter sequence in RNAseq fastq file from a paper.
updated 16 months ago by 43k • written 9.0 years ago by 6.2k
2
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1
reply
3.5k
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Answer: Answer: Count of GC in row, but not from N bases
updated 16 months ago by 43k • written 9.0 years ago by 6.2k
5
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1
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27k
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Answer: Answer: Remove duplicates in fasta file based on ID
updated 16 months ago by 43k • written 9.0 years ago by 6.2k
0
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0
replies
2.5k
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Answer: Answer: Filter fastq file by first two base pairs
updated 16 months ago by 43k • written 9.0 years ago by 6.2k
5
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0
replies
6.7k
views
Answer: Answer: How to get CDS.fasta from gff file + sequenceFile.fasta
updated 16 months ago by 43k • written 9.0 years ago by 6.2k
2
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1
reply
5.0k
views
Answer: Answer: can I get a heat map from two groups of transcriptome data?
updated 15 months ago by 43k • written 9.0 years ago by 6.2k
1
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0
replies
3.0k
views
Answer: A: svtyper tool: ValueError: mate not found
9.0 years ago by iraun 6.2k
4
votes
2
replies
8.1k
views
Answer: Answer: Best bioinfo one-liners?
updated 16 months ago by 43k • written 9.0 years ago by 6.2k
3
votes
1
reply
4.7k
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Answer: Answer: Using Rsamtools to see genome coverage of a BAM file
updated 15 months ago by 43k • written 9.0 years ago by 6.2k
0
votes
1
reply
2.5k
views
Answer: Answer: Compare one of the columns of two seperate files and write the raw of the second
updated 15 months ago by 43k • written 9.0 years ago by 6.2k
3
votes
0
replies
3.9k
views
Answer: A: Tools for filtering SNPs near indels in VCF files
9.0 years ago by iraun 6.2k
2
votes
1
reply
4.1k
views
Answer: Answer: How to identify Denovo Mutations in the child compared with parents?
updated 15 months ago by 43k • written 9.0 years ago by 6.2k
2
votes
1
reply
2.1k
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Answer: Answer: Complex and Complicated RNAseq analysis
updated 15 months ago by 43k • written 9.0 years ago by 6.2k
2
votes
2
replies
4.8k
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Answer: C: Multiple VCF file comparision
9.0 years ago by iraun 6.2k
2
votes
2
replies
2.4k
views
Answer: Answer: Extraction of nt bases from sequence
updated 22 months ago by 43k • written 9.0 years ago by 6.2k
2
votes
0
replies
2.6k
views
Answer: A: Whole exome sequencing de novo assembly
9.1 years ago by iraun 6.2k
2
votes
0
replies
1.4k
views
Answer: A: Is there any tools to compare the quality of different assemble read (contigs)
9.1 years ago by iraun 6.2k
6
votes
2
replies
25k
views
Answer: Answer: searching reads with a certain sequence in fastq file
updated 2.3 years ago by 43k • written 9.1 years ago by 6.2k
5
votes
0
replies
29k
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Answer: Answer: How bcftools isec works ?
updated 23 months ago by 43k • written 9.1 years ago by 6.2k
0
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1
reply
6.7k
views
Answer: Answer: ERROR on tophat: Mapping left_kept_reads to genome Athaliana with Bowtie2
updated 2.0 years ago by 43k • written 9.2 years ago by 6.2k
0
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1
reply
2.5k
views
Answer: Answer: Ensembl chromosome name?
updated 2.1 years ago by 43k • written 9.2 years ago by 6.2k
2
votes
1
reply
5.6k
views
Answer: Answer: script to filter contigs >1kb
updated 2.1 years ago by 43k • written 9.3 years ago by 6.2k
2
votes
1
reply
2.6k
views
Answer: Answer: How to include strand information in the result when running bedtools complement
updated 2.1 years ago by 43k • written 9.3 years ago by 6.2k
3
votes
0
replies
2.1k
views
Answer: Answer: executing custom format for outfmt format 7
updated 2.1 years ago by 43k • written 9.3 years ago by 6.2k
1
vote
1
reply
2.9k
views
Answer: Answer: Output unmapped reads to a file when using tophat2
updated 2.1 years ago by 43k • written 9.3 years ago by 6.2k
3
votes
1
reply
2.7k
views
Answer: Answer: NCBI Human Variation Sets VCF validation
updated 2.1 years ago by 43k • written 9.3 years ago by 6.2k
9
votes
0
replies
12k
views
Answer: Answer: Question about gens name starting "LOC~"
updated 2.1 years ago by 43k • written 9.3 years ago by 6.2k
1
vote
2
replies
7.9k
views
Answer: C: Counting number of duplicated reads from fastq file
9.3 years ago by iraun 6.2k
181 results • Page 3 of 4
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