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0
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1
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645
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Comment:
Comment: I want to merge gene sequences in fasta to create one genome from all cds region
4 months ago by
kashiff007
★ 1.9k
1
vote
1
reply
441
views
Comment:
Comment: Trim contamined reads for RNA-seq
4 months ago by
kashiff007
★ 1.9k
2
votes
1
reply
441
views
Answer:
Answer: Trim contamined reads for RNA-seq
4 months ago by
kashiff007
★ 1.9k
0
votes
1
reply
421
views
Comment:
Comment: Comparing expression of DEG gene in samples
12 months ago by
kashiff007
★ 1.9k
1
vote
0
replies
1.1k
views
Comment:
Comment: Same sequencing sample in multiple lanes. How to analyse it?
15 months ago by
kashiff007
★ 1.9k
1
vote
1
reply
1.1k
views
Comment:
Comment: Same sequencing sample in multiple lanes. How to analyse it?
15 months ago by
kashiff007
★ 1.9k
0
votes
2
replies
625
views
Comment:
Comment: VariantsToTable not produce output file
15 months ago by
kashiff007
★ 1.9k
1
vote
1
reply
567
views
Comment:
Comment: fastq-dump command
15 months ago by
kashiff007
★ 1.9k
1
vote
1
reply
1.1k
views
Comment:
Comment: bedGraphtoBigWig- Converting INSDC chromosome names to UCSC names
15 months ago by
kashiff007
★ 1.9k
1
vote
1
reply
1.3k
views
Answer:
Answer: Is there a way to mark up specific genes in MA-plot?
15 months ago by
kashiff007
★ 1.9k
1
vote
0
replies
345
views
Answer:
Answer: How to calculate all possible chromatin interactions in a given sample?
15 months ago by
kashiff007
★ 1.9k
1
vote
0
replies
386
views
Comment:
Comment: sequence splitting
15 months ago by
kashiff007
★ 1.9k
0
votes
1
reply
567
views
Comment:
Comment: fastq-dump command
15 months ago by
kashiff007
★ 1.9k
3
votes
1
reply
677
views
Comment:
Comment: RNASeq deseq2
15 months ago by
kashiff007
★ 1.9k
1
vote
1
reply
783
views
Comment:
Comment: AnnotationForge and Error in FUN(X[[i]], ...) : data.frames in '...' cannot c
15 months ago by
kashiff007
★ 1.9k
1
vote
0
replies
496
views
Answer:
Answer: How can I split the names and a. acid sequences of certain organisms into column
15 months ago by
kashiff007
★ 1.9k
2
votes
0
replies
560
views
Answer:
Answer: Finding mutations by Ilumina rna-seq data
15 months ago by
kashiff007
★ 1.9k
0
votes
0
replies
1.0k
views
Answer:
Answer: How can I bring similar columns from two different tables side by side?
15 months ago by
kashiff007
★ 1.9k
4
votes
1
reply
677
views
Answer:
Answer: RNASeq deseq2
15 months ago by
kashiff007
★ 1.9k
1
vote
1
reply
1.1k
views
Answer:
Answer: bedGraphtoBigWig- Converting INSDC chromosome names to UCSC names
15 months ago by
kashiff007
★ 1.9k
2
votes
0
replies
337
views
Answer:
Answer: How to increase space in Y axis label
16 months ago by
kashiff007
★ 1.9k
1
vote
1
reply
809
views
Comment:
Comment: Filtering Gene by mean expression
18 months ago by
kashiff007
★ 1.9k
2
votes
1
reply
1.3k
views
Comment:
Comment: featureCounts fragment count
18 months ago by
kashiff007
★ 1.9k
2
votes
1
reply
6.1k
views
Comment:
Comment: heatmap by r studio
18 months ago by
kashiff007
★ 1.9k
3
votes
0
replies
1.1k
views
Comment:
Comment: Extract information from prokka gff files
18 months ago by
kashiff007
★ 1.9k
3
votes
1
reply
1.5k
views
Comment:
Comment: How to get/calculate coverage of a gene using bed file?
18 months ago by
kashiff007
★ 1.9k
3
votes
2
replies
2.3k
views
Comment:
Comment: using rsem sample.genome.STAR.genome.bam for calculating expression
18 months ago by
kashiff007
★ 1.9k
3
votes
1
reply
1.5k
views
Comment:
Comment: How to get/calculate coverage of a gene using bed file?
18 months ago by
kashiff007
★ 1.9k
2
votes
0
replies
436
views
Comment:
Comment: Sorting .bed file by genes size
18 months ago by
kashiff007
★ 1.9k
0
votes
0
replies
581
views
Comment:
Comment: ChIP-seq analysis differential peak analysis regarding spike-in
18 months ago by
kashiff007
★ 1.9k
0
votes
0
replies
478
views
Answer:
Answer: How to identify corresponding chromosomes and coordinates of a species for query
18 months ago by
kashiff007
★ 1.9k
1
vote
1
reply
717
views
Answer:
Answer: DNA methylation batch effect remove
18 months ago by
kashiff007
★ 1.9k
6
votes
0
replies
790
views
Answer:
Answer: Having a deletion coordinates how to know in which gene this is?
19 months ago by
kashiff007
★ 1.9k
3
votes
0
replies
688
views
Answer:
Answer: How select top enriched regions from plotHeatmap outputs?
19 months ago by
kashiff007
★ 1.9k
3
votes
0
replies
732
views
Comment:
Comment: Heatmap when having duplicated genes and samples
19 months ago by
kashiff007
★ 1.9k
6
votes
2
replies
732
views
Answer:
Answer: Heatmap when having duplicated genes and samples
19 months ago by
kashiff007
★ 1.9k
7
votes
1
reply
509
views
Compare genotype genome sequences at basepair level
genotype
comparative-genomics
updated 3 months ago by
Ram
39k • written 19 months ago by
kashiff007
★ 1.9k
0
votes
1
reply
732
views
Comment:
Comment: Heatmap when having duplicated genes and samples
19 months ago by
kashiff007
★ 1.9k
5
votes
0
replies
2.6k
views
Answer:
Answer: How to get output of annotated genes from ChIPseeker tool
20 months ago by
kashiff007
★ 1.9k
1
vote
1
reply
2.6k
views
Comment:
Comment: Where Does The Pvalue Comes From In Macs14
23 months ago by
kashiff007
★ 1.9k
3
votes
0
replies
927
views
Bismark methylation for non-uniquely mapping BS-seq reads
DNA methylation
bismark
sequencing
small RNAs
2.9 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
1.2k
views
Comment:
C: Extract last exon annotation from each mRNA
3.2 years ago by
kashiff007
★ 1.9k
2
votes
0
replies
1.2k
views
Comment:
C: Extract last exon annotation from each mRNA
3.2 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
1.2k
views
Comment:
C: Extract last exon annotation from each mRNA
3.2 years ago by
kashiff007
★ 1.9k
11
votes
7
replies
1.2k
views
Extract last exon annotation from each mRNA
GFFUtils
3.2 years ago by
kashiff007
★ 1.9k
3
votes
1
reply
944
views
Average length of each exon and intron
next-gen
gtf
gff
bed
bedtools
3.2 years ago by
kashiff007
★ 1.9k
1
vote
0
replies
7.3k
views
Comment:
C: Interpreting Bismark Methylation Extractor output
3.3 years ago by
kashiff007
★ 1.9k
3
votes
0
replies
16k
views
Answer:
A: Mismatch Option In Bowtie2
updated 3.4 years ago by
Ram
39k • written 7.3 years ago by
kashiff007
★ 1.9k
9
votes
5
replies
1.5k
views
Plot read density across a normalized gene model for its each exon/intron length
ChIP-Seq
deeptools
next-gen
R
python
updated 3.5 years ago by
benformatics
3.6k • written 3.5 years ago by
kashiff007
★ 1.9k
2
votes
0
replies
1.5k
views
Comment:
C: Plot read density across a normalized gene model for its each exon/intron length
3.5 years ago by
kashiff007
★ 1.9k
89 results • Page
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