Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
0
votes
1
reply
589
views
Comment: Comment: I want to merge gene sequences in fasta to create one genome from all cds region
10 weeks ago by kashiff007 ★ 1.9k
1
vote
1
reply
392
views
Comment: Comment: Trim contamined reads for RNA-seq
10 weeks ago by kashiff007 ★ 1.9k
2
votes
1
reply
392
views
Answer: Answer: Trim contamined reads for RNA-seq
10 weeks ago by kashiff007 ★ 1.9k
0
votes
1
reply
400
views
Comment: Comment: Comparing expression of DEG gene in samples
10 months ago by kashiff007 ★ 1.9k
1
vote
0
replies
815
views
Comment: Comment: Same sequencing sample in multiple lanes. How to analyse it?
13 months ago by kashiff007 ★ 1.9k
1
vote
1
reply
815
views
Comment: Comment: Same sequencing sample in multiple lanes. How to analyse it?
13 months ago by kashiff007 ★ 1.9k
0
votes
2
replies
587
views
Comment: Comment: VariantsToTable not produce output file
13 months ago by kashiff007 ★ 1.9k
1
vote
1
reply
537
views
Comment: Comment: fastq-dump command
13 months ago by kashiff007 ★ 1.9k
1
vote
1
reply
941
views
Comment: Comment: bedGraphtoBigWig- Converting INSDC chromosome names to UCSC names
13 months ago by kashiff007 ★ 1.9k
1
vote
1
reply
1.1k
views
Answer: Answer: Is there a way to mark up specific genes in MA-plot?
13 months ago by kashiff007 ★ 1.9k
1
vote
0
replies
332
views
Answer: Answer: How to calculate all possible chromatin interactions in a given sample?
13 months ago by kashiff007 ★ 1.9k
1
vote
0
replies
364
views
Comment: Comment: sequence splitting
13 months ago by kashiff007 ★ 1.9k
0
votes
1
reply
537
views
Comment: Comment: fastq-dump command
13 months ago by kashiff007 ★ 1.9k
3
votes
1
reply
624
views
Comment: Comment: RNASeq deseq2
13 months ago by kashiff007 ★ 1.9k
1
vote
1
reply
658
views
Comment: Comment: AnnotationForge and Error in FUN(X[[i]], ...) : data.frames in '...' cannot c
13 months ago by kashiff007 ★ 1.9k
1
vote
0
replies
478
views
Answer: Answer: How can I split the names and a. acid sequences of certain organisms into column
13 months ago by kashiff007 ★ 1.9k
2
votes
0
replies
534
views
Answer: Answer: Finding mutations by Ilumina rna-seq data
13 months ago by kashiff007 ★ 1.9k
0
votes
0
replies
973
views
Answer: Answer: How can I bring similar columns from two different tables side by side?
13 months ago by kashiff007 ★ 1.9k
4
votes
1
reply
624
views
Answer: Answer: RNASeq deseq2
13 months ago by kashiff007 ★ 1.9k
1
vote
1
reply
941
views
Answer: Answer: bedGraphtoBigWig- Converting INSDC chromosome names to UCSC names
13 months ago by kashiff007 ★ 1.9k
2
votes
0
replies
311
views
Answer: Answer: How to increase space in Y axis label
14 months ago by kashiff007 ★ 1.9k
1
vote
1
reply
757
views
Comment: Comment: Filtering Gene by mean expression
16 months ago by kashiff007 ★ 1.9k
2
votes
1
reply
1.2k
views
Comment: Comment: featureCounts fragment count
16 months ago by kashiff007 ★ 1.9k
2
votes
1
reply
5.3k
views
Comment: Comment: heatmap by r studio
16 months ago by kashiff007 ★ 1.9k
3
votes
0
replies
970
views
Comment: Comment: Extract information from prokka gff files
16 months ago by kashiff007 ★ 1.9k
3
votes
1
reply
1.3k
views
Comment: Comment: How to get/calculate coverage of a gene using bed file?
16 months ago by kashiff007 ★ 1.9k
3
votes
2
replies
2.0k
views
Comment: Comment: using rsem sample.genome.STAR.genome.bam for calculating expression
16 months ago by kashiff007 ★ 1.9k
3
votes
1
reply
1.3k
views
Comment: Comment: How to get/calculate coverage of a gene using bed file?
16 months ago by kashiff007 ★ 1.9k
2
votes
0
replies
412
views
Comment: Comment: Sorting .bed file by genes size
16 months ago by kashiff007 ★ 1.9k
0
votes
0
replies
546
views
Comment: Comment: ChIP-seq analysis differential peak analysis regarding spike-in
16 months ago by kashiff007 ★ 1.9k
0
votes
0
replies
455
views
Answer: Answer: How to identify corresponding chromosomes and coordinates of a species for query
16 months ago by kashiff007 ★ 1.9k
1
vote
1
reply
653
views
Answer: Answer: DNA methylation batch effect remove
16 months ago by kashiff007 ★ 1.9k
6
votes
0
replies
734
views
Answer: Answer: Having a deletion coordinates how to know in which gene this is?
16 months ago by kashiff007 ★ 1.9k
3
votes
0
replies
615
views
Answer: Answer: How select top enriched regions from plotHeatmap outputs?
16 months ago by kashiff007 ★ 1.9k
3
votes
0
replies
669
views
Comment: Comment: Heatmap when having duplicated genes and samples
16 months ago by kashiff007 ★ 1.9k
6
votes
2
replies
669
views
Answer: Answer: Heatmap when having duplicated genes and samples
16 months ago by kashiff007 ★ 1.9k
7
votes
1
reply
469
views
Compare genotype genome sequences at basepair level
genotype comparative-genomics
updated 6 weeks ago by 38k • written 16 months ago by ★ 1.9k
0
votes
1
reply
669
views
Comment: Comment: Heatmap when having duplicated genes and samples
16 months ago by kashiff007 ★ 1.9k
5
votes
0
replies
2.4k
views
Answer: Answer: How to get output of annotated genes from ChIPseeker tool
18 months ago by kashiff007 ★ 1.9k
1
vote
1
reply
2.6k
views
Comment: Comment: Where Does The Pvalue Comes From In Macs14
21 months ago by kashiff007 ★ 1.9k
3
votes
0
replies
895
views
Bismark methylation for non-uniquely mapping BS-seq reads
DNA methylation bismark sequencing small RNAs
2.8 years ago by kashiff007 ★ 1.9k
1
vote
1
reply
1.1k
views
Comment: C: Extract last exon annotation from each mRNA
3.0 years ago by kashiff007 ★ 1.9k
2
votes
0
replies
1.1k
views
Comment: C: Extract last exon annotation from each mRNA
3.0 years ago by kashiff007 ★ 1.9k
1
vote
1
reply
1.1k
views
Comment: C: Extract last exon annotation from each mRNA
3.0 years ago by kashiff007 ★ 1.9k
11
votes
7
replies
1.1k
views
Extract last exon annotation from each mRNA
GFFUtils
3.0 years ago by kashiff007 ★ 1.9k
3
votes
1
reply
902
views
Average length of each exon and intron
next-gen gtf gff bed bedtools
3.0 years ago by kashiff007 ★ 1.9k
1
vote
0
replies
6.9k
views
Comment: C: Interpreting Bismark Methylation Extractor output
3.2 years ago by kashiff007 ★ 1.9k
3
votes
0
replies
15k
views
Answer: A: Mismatch Option In Bowtie2
updated 3.2 years ago by 38k • written 7.2 years ago by ★ 1.9k
9
votes
5
replies
1.4k
views
Plot read density across a normalized gene model for its each exon/intron length
ChIP-Seq deeptools next-gen R python
updated 3.3 years ago by 3.5k • written 3.3 years ago by ★ 1.9k
2
votes
0
replies
1.4k
views
Comment: C: Plot read density across a normalized gene model for its each exon/intron length
3.3 years ago by kashiff007 ★ 1.9k
89 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6