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1.3k
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Comment:
Comment: Error when trying to create a heatmap with DESeq2
18 months ago by
kashiff007
★ 1.9k
0
votes
1
reply
1.5k
views
Comment:
Comment: I want to merge gene sequences in fasta to create one genome from all cds region
2.3 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
1.3k
views
Comment:
Comment: Trim contamined reads for RNA-seq
2.3 years ago by
kashiff007
★ 1.9k
0
votes
1
reply
900
views
Comment:
Comment: Comparing expression of DEG gene in samples
2.9 years ago by
kashiff007
★ 1.9k
1
vote
0
replies
3.6k
views
Comment:
Comment: Same sequencing sample in multiple lanes. How to analyse it?
3.2 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
3.6k
views
Comment:
Comment: Same sequencing sample in multiple lanes. How to analyse it?
3.2 years ago by
kashiff007
★ 1.9k
0
votes
2
replies
1.3k
views
Comment:
Comment: VariantsToTable not produce output file
3.2 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
1.2k
views
Comment:
Comment: fastq-dump command
3.2 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
2.6k
views
Comment:
Comment: bedGraphtoBigWig- Converting INSDC chromosome names to UCSC names
3.2 years ago by
kashiff007
★ 1.9k
1
vote
0
replies
841
views
Comment:
Comment: sequence splitting
3.2 years ago by
kashiff007
★ 1.9k
0
votes
1
reply
1.2k
views
Comment:
Comment: fastq-dump command
3.2 years ago by
kashiff007
★ 1.9k
3
votes
1
reply
1.3k
views
Comment:
Comment: RNASeq deseq2
3.2 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
1.6k
views
Comment:
Comment: AnnotationForge and Error in FUN(X[[i]], ...) : data.frames in '...' cannot c
3.2 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
1.5k
views
Comment:
Comment: Filtering Gene by mean expression
3.4 years ago by
kashiff007
★ 1.9k
2
votes
1
reply
2.4k
views
Comment:
Comment: featureCounts fragment count
3.4 years ago by
kashiff007
★ 1.9k
2
votes
1
reply
12k
views
Comment:
Comment: heatmap by r studio
3.4 years ago by
kashiff007
★ 1.9k
3
votes
0
replies
2.1k
views
Comment:
Comment: Extract information from prokka gff files
3.4 years ago by
kashiff007
★ 1.9k
3
votes
1
reply
2.5k
views
Comment:
Comment: How to get/calculate coverage of a gene using bed file?
3.4 years ago by
kashiff007
★ 1.9k
3
votes
2
replies
4.9k
views
Comment:
Comment: using rsem sample.genome.STAR.genome.bam for calculating expression
3.5 years ago by
kashiff007
★ 1.9k
3
votes
1
reply
2.5k
views
Comment:
Comment: How to get/calculate coverage of a gene using bed file?
3.5 years ago by
kashiff007
★ 1.9k
2
votes
0
replies
819
views
Comment:
Comment: Sorting .bed file by genes size
3.5 years ago by
kashiff007
★ 1.9k
0
votes
0
replies
1.1k
views
Comment:
Comment: ChIP-seq analysis differential peak analysis regarding spike-in
3.5 years ago by
kashiff007
★ 1.9k
3
votes
0
replies
1.5k
views
Comment:
Comment: Heatmap when having duplicated genes and samples
3.5 years ago by
kashiff007
★ 1.9k
0
votes
1
reply
1.5k
views
Comment:
Comment: Heatmap when having duplicated genes and samples
3.5 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
3.2k
views
Comment:
Comment: Where Does The Pvalue Comes From In Macs14
3.8 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
1.9k
views
Comment:
C: Extract last exon annotation from each mRNA
5.1 years ago by
kashiff007
★ 1.9k
2
votes
0
replies
1.9k
views
Comment:
C: Extract last exon annotation from each mRNA
5.1 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
1.9k
views
Comment:
C: Extract last exon annotation from each mRNA
5.1 years ago by
kashiff007
★ 1.9k
1
vote
0
replies
10k
views
Comment:
C: Interpreting Bismark Methylation Extractor output
5.2 years ago by
kashiff007
★ 1.9k
2
votes
0
replies
2.2k
views
Comment:
C: Plot read density across a normalized gene model for its each exon/intron length
5.4 years ago by
kashiff007
★ 1.9k
2
votes
0
replies
2.2k
views
Comment:
C: Plot read density across a normalized gene model for its each exon/intron length
5.4 years ago by
kashiff007
★ 1.9k
1
vote
0
replies
35k
views
Comment:
C: Converstion of BED with scores into bigWig
updated 5.5 years ago by
Ram
45k • written 7.6 years ago by
kashiff007
★ 1.9k
1
vote
0
replies
3.6k
views
Comment:
C: Error :creating a custom BS genome pakage for Olea Europeae
5.6 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
1.4k
views
Comment:
C: Reporting methylation of both Cs and Gs, or only Cs
5.7 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
4.4k
views
Comment:
C: plot error x y length difference
5.8 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
2.0k
views
Comment:
C: macs14 replicates treatment and final wiggle peak files
5.9 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
2.0k
views
Comment:
C: macs14 replicates treatment and final wiggle peak files
5.9 years ago by
kashiff007
★ 1.9k
1
vote
0
replies
2.0k
views
Comment:
C: Number of discovered genes in genome does not correspond with published annotati
6.2 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
2.0k
views
Comment:
C: Number of discovered genes in genome does not correspond with published annotati
6.2 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
2.0k
views
Comment:
A: Number of discovered genes in genome does not correspond with published annotati
6.2 years ago by
kashiff007
★ 1.9k
1
vote
0
replies
1.4k
views
Comment:
C: How to subset S4 list with 5 Granges elements
6.2 years ago by
kashiff007
★ 1.9k
4
votes
0
replies
3.9k
views
Comment:
C: Multiple sequence alignment and visualisation for bacterial genomes
6.2 years ago by
kashiff007
★ 1.9k
1
vote
0
replies
4.9k
views
Comment:
C: Finding Minisatellite Repeat Motives In Dna
6.9 years ago by
kashiff007
★ 1.9k
1
vote
0
replies
12k
views
Comment:
C: How to extract bigWig signal for a given bed file?
7.1 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
12k
views
Comment:
C: How to extract bigWig signal for a given bed file?
7.1 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
12k
views
Comment:
C: How to extract bigWig signal for a given bed file?
7.2 years ago by
kashiff007
★ 1.9k
2
votes
2
replies
8.5k
views
Comment:
C: MCScanX result problem
7.6 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
8.5k
views
Comment:
C: MCScanX result problem
7.6 years ago by
kashiff007
★ 1.9k
1
vote
0
replies
1.7k
views
Comment:
C: Compare mus musculus and mus spretus genome structure annotation
7.6 years ago by
kashiff007
★ 1.9k
1
vote
1
reply
8.5k
views
Comment:
C: MCScanX result problem
7.6 years ago by
kashiff007
★ 1.9k
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