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Comment: Comment: Error when trying to create a heatmap with DESeq2
18 months ago by kashiff007 ★ 1.9k
0
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1
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1.5k
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Comment: Comment: I want to merge gene sequences in fasta to create one genome from all cds region
2.3 years ago by kashiff007 ★ 1.9k
1
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1
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1.3k
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Comment: Comment: Trim contamined reads for RNA-seq
2.3 years ago by kashiff007 ★ 1.9k
0
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1
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900
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Comment: Comment: Comparing expression of DEG gene in samples
2.9 years ago by kashiff007 ★ 1.9k
1
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0
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3.6k
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Comment: Comment: Same sequencing sample in multiple lanes. How to analyse it?
3.2 years ago by kashiff007 ★ 1.9k
1
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1
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3.6k
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Comment: Comment: Same sequencing sample in multiple lanes. How to analyse it?
3.2 years ago by kashiff007 ★ 1.9k
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2
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1.3k
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Comment: Comment: VariantsToTable not produce output file
3.2 years ago by kashiff007 ★ 1.9k
1
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1
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1.2k
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Comment: Comment: fastq-dump command
3.2 years ago by kashiff007 ★ 1.9k
1
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1
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2.6k
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Comment: Comment: bedGraphtoBigWig- Converting INSDC chromosome names to UCSC names
3.2 years ago by kashiff007 ★ 1.9k
1
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0
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841
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Comment: Comment: sequence splitting
3.2 years ago by kashiff007 ★ 1.9k
0
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1
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1.2k
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Comment: Comment: fastq-dump command
3.2 years ago by kashiff007 ★ 1.9k
3
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1
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1.3k
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Comment: Comment: RNASeq deseq2
3.2 years ago by kashiff007 ★ 1.9k
1
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1
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1.6k
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Comment: Comment: AnnotationForge and Error in FUN(X[[i]], ...) : data.frames in '...' cannot c
3.2 years ago by kashiff007 ★ 1.9k
1
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1
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1.5k
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Comment: Comment: Filtering Gene by mean expression
3.4 years ago by kashiff007 ★ 1.9k
2
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1
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2.4k
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Comment: Comment: featureCounts fragment count
3.4 years ago by kashiff007 ★ 1.9k
2
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1
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12k
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Comment: Comment: heatmap by r studio
3.4 years ago by kashiff007 ★ 1.9k
3
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0
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2.1k
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Comment: Comment: Extract information from prokka gff files
3.4 years ago by kashiff007 ★ 1.9k
3
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1
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2.5k
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Comment: Comment: How to get/calculate coverage of a gene using bed file?
3.4 years ago by kashiff007 ★ 1.9k
3
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2
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4.9k
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Comment: Comment: using rsem sample.genome.STAR.genome.bam for calculating expression
3.5 years ago by kashiff007 ★ 1.9k
3
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1
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2.5k
views
Comment: Comment: How to get/calculate coverage of a gene using bed file?
3.5 years ago by kashiff007 ★ 1.9k
2
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0
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819
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Comment: Comment: Sorting .bed file by genes size
3.5 years ago by kashiff007 ★ 1.9k
0
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0
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1.1k
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Comment: Comment: ChIP-seq analysis differential peak analysis regarding spike-in
3.5 years ago by kashiff007 ★ 1.9k
3
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0
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1.5k
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Comment: Comment: Heatmap when having duplicated genes and samples
3.5 years ago by kashiff007 ★ 1.9k
0
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1
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1.5k
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Comment: Comment: Heatmap when having duplicated genes and samples
3.5 years ago by kashiff007 ★ 1.9k
1
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1
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3.2k
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Comment: Comment: Where Does The Pvalue Comes From In Macs14
3.8 years ago by kashiff007 ★ 1.9k
1
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1
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1.9k
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Comment: C: Extract last exon annotation from each mRNA
5.1 years ago by kashiff007 ★ 1.9k
2
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0
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1.9k
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Comment: C: Extract last exon annotation from each mRNA
5.1 years ago by kashiff007 ★ 1.9k
1
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1
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1.9k
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Comment: C: Extract last exon annotation from each mRNA
5.1 years ago by kashiff007 ★ 1.9k
1
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0
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10k
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Comment: C: Interpreting Bismark Methylation Extractor output
5.2 years ago by kashiff007 ★ 1.9k
2
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0
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2.2k
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Comment: C: Plot read density across a normalized gene model for its each exon/intron length
5.4 years ago by kashiff007 ★ 1.9k
2
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0
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2.2k
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Comment: C: Plot read density across a normalized gene model for its each exon/intron length
5.4 years ago by kashiff007 ★ 1.9k
1
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0
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35k
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Comment: C: Converstion of BED with scores into bigWig
updated 5.5 years ago by 45k • written 7.6 years ago by ★ 1.9k
1
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0
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3.6k
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Comment: C: Error :creating a custom BS genome pakage for Olea Europeae
5.6 years ago by kashiff007 ★ 1.9k
1
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1
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1.4k
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Comment: C: Reporting methylation of both Cs and Gs, or only Cs
5.7 years ago by kashiff007 ★ 1.9k
1
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1
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4.4k
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Comment: C: plot error x y length difference
5.8 years ago by kashiff007 ★ 1.9k
1
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1
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2.0k
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Comment: C: macs14 replicates treatment and final wiggle peak files
5.9 years ago by kashiff007 ★ 1.9k
1
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1
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2.0k
views
Comment: C: macs14 replicates treatment and final wiggle peak files
5.9 years ago by kashiff007 ★ 1.9k
1
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0
replies
2.0k
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Comment: C: Number of discovered genes in genome does not correspond with published annotati
6.2 years ago by kashiff007 ★ 1.9k
1
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1
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2.0k
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Comment: C: Number of discovered genes in genome does not correspond with published annotati
6.2 years ago by kashiff007 ★ 1.9k
1
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1
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2.0k
views
Comment: A: Number of discovered genes in genome does not correspond with published annotati
6.2 years ago by kashiff007 ★ 1.9k
1
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0
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1.4k
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Comment: C: How to subset S4 list with 5 Granges elements
6.2 years ago by kashiff007 ★ 1.9k
4
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0
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3.9k
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Comment: C: Multiple sequence alignment and visualisation for bacterial genomes
6.2 years ago by kashiff007 ★ 1.9k
1
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0
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4.9k
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Comment: C: Finding Minisatellite Repeat Motives In Dna
6.9 years ago by kashiff007 ★ 1.9k
1
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0
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12k
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Comment: C: How to extract bigWig signal for a given bed file?
7.1 years ago by kashiff007 ★ 1.9k
1
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1
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12k
views
Comment: C: How to extract bigWig signal for a given bed file?
7.1 years ago by kashiff007 ★ 1.9k
1
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1
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12k
views
Comment: C: How to extract bigWig signal for a given bed file?
7.2 years ago by kashiff007 ★ 1.9k
2
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2
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8.5k
views
Comment: C: MCScanX result problem
7.6 years ago by kashiff007 ★ 1.9k
1
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1
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8.5k
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Comment: C: MCScanX result problem
7.6 years ago by kashiff007 ★ 1.9k
1
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0
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1.7k
views
Comment: C: Compare mus musculus and mus spretus genome structure annotation
7.6 years ago by kashiff007 ★ 1.9k
1
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1
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8.5k
views
Comment: C: MCScanX result problem
7.6 years ago by kashiff007 ★ 1.9k
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