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Answer: Answer: Working with NCBI downloadable Datasets
5 months ago by rfran010 ▴ 900
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1
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720
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Answer: Answer: Writing a for loop with if statement to concatenate files with the same end of n
7 months ago by rfran010 ▴ 900
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0
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1.3k
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Answer: Answer: Getting the overlap between two GTF files
7 months ago by rfran010 ▴ 900
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772
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Answer: Answer: How the first sequencing template removed in pair end sequencing
7 months ago by rfran010 ▴ 900
3
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2
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1.6k
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Answer: Answer: Can BWA (mem) detect longer deletions?
updated 8 months ago by 82k • written 8 months ago by ▴ 900
2
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2
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971
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Answer: Answer: How is the format of the bed file for samtools ampliconclip
8 months ago by rfran010 ▴ 900
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0
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666
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Answer: Answer: Filtering transcription factor and HOMER and ENCODE
8 months ago by rfran010 ▴ 900
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1.1k
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Answer: Answer: What is the common practice to view WGS data on IGV?
8 months ago by rfran010 ▴ 900
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871
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Answer: Answer: Interpreting HOMER peak calling score and annotation file
9 months ago by rfran010 ▴ 900
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1
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559
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Answer: Answer: path error
9 months ago by rfran010 ▴ 900
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2
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1.5k
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Answer: Answer: From primers sequence to Bed file
10 months ago by rfran010 ▴ 900
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679
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Answer: Answer: Help with htseq -count read counts
10 months ago by rfran010 ▴ 900
3
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1
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512
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Answer: Answer: many more ChIP-seq peaks called in 1 condition than the other
10 months ago by rfran010 ▴ 900
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0
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424
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Answer: Answer: Help with an ATAC-seq cartoon
10 months ago by rfran010 ▴ 900
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1.3k
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Answer: Answer: Help understanding enhancer and promoter annotation
10 months ago by rfran010 ▴ 900
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0
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1.4k
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Answer: Answer: Information of bioinfbook
10 months ago by rfran010 ▴ 900
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568
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Answer: Answer: which conclusion can get from the cell cycle analysis of scRNAseq data
10 months ago by rfran010 ▴ 900
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0
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454
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Answer: Answer: Coding sequence
10 months ago by rfran010 ▴ 900
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0
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559
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Answer: Answer: differential gene expression gene names/id vs transcript id
10 months ago by rfran010 ▴ 900
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0
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585
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Answer: Answer: Plotting ATAC-seq data over RNA-seq?
10 months ago by rfran010 ▴ 900
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1
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959
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Answer: Answer: BAM file contains much more reads than expected
10 months ago by rfran010 ▴ 900
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1
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597
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Answer: Answer: HEATMAP based on DEG data
10 months ago by rfran010 ▴ 900
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1
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757
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Answer: Answer: GSEA data
10 months ago by rfran010 ▴ 900
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0
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527
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Answer: Answer: How to find peaks with specific TFs identified by HOMER
10 months ago by rfran010 ▴ 900
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1
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2.6k
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Answer: Answer: SEACR and MACS2
10 months ago by rfran010 ▴ 900
2
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0
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609
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Answer: Answer: How to figure out adapter sequences in RNA seq?
10 months ago by rfran010 ▴ 900
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1
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670
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Answer: Answer: How to choose the important clusters for RNAseq data of different groups for do
11 months ago by rfran010 ▴ 900
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1
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1.1k
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Answer: Answer: How to get information about promoter from bulk-RNAseq?
11 months ago by rfran010 ▴ 900
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0
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1.9k
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Answer: Answer: Get relationships and hierarchies for GO terms
11 months ago by rfran010 ▴ 900
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1
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1.2k
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Answer: Answer: RNASeq gene labeling and mRNA filter from bulkRNA data.
11 months ago by rfran010 ▴ 900
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1
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901
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Answer: Answer: Make a BedGraph file
11 months ago by rfran010 ▴ 900
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0
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1.0k
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Answer: Answer: What is the best way to clean bulk RNA-seq data?
11 months ago by rfran010 ▴ 900
2
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1
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2.5k
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Answer: Answer: Help with running ATAC using Encode pipeline
11 months ago by rfran010 ▴ 900
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0
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1.2k
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Answer: Answer: BioInformatics, Software
11 months ago by rfran010 ▴ 900
2
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2
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1.6k
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Answer: Answer: how to design a guide RNA
12 months ago by rfran010 ▴ 900
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2
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1.7k
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Answer: Answer: best annotation approach for peaks
12 months ago by rfran010 ▴ 900
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0
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1.5k
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Answer: Answer: Intersecting transcriptome bam file with GTF file
12 months ago by rfran010 ▴ 900
2
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1
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928
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Answer: Answer: ATAC peak-calling: same peak ID across multiple experimental conditions?
12 months ago by rfran010 ▴ 900
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1
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1.5k
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Answer: Answer: Encode project signal p-value
12 months ago by rfran010 ▴ 900
0
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0
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831
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Answer: Answer: How to obtain low mappability regions from UCSC for deepTools computeGCBias?
12 months ago by rfran010 ▴ 900
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