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10k
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Answer:
A: what are the best resource to learn Linux bash scripting for Bioinformatics
updated 4.4 years ago by
Ram
43k • written 9.9 years ago by
Ann
★ 2.4k
2
votes
1
reply
6.6k
views
Answer:
A: IGV for RNA-SEQ
updated 4.4 years ago by
Ram
43k • written 9.9 years ago by
Ann
★ 2.4k
3
votes
1
reply
6.3k
views
Answer:
A: Normalizing For Batch Effect In RNA-Seq Data
updated 4.4 years ago by
Ram
43k • written 10.1 years ago by
Ann
★ 2.4k
3
votes
0
replies
41k
views
Answer:
A: Will Python Take The Place Of R?
updated 4.4 years ago by
Ram
43k • written 10.1 years ago by
Ann
★ 2.4k
2
votes
1
reply
19k
views
Answer:
A: Is There Any Other Method For Isoform-Level Differential Expression Analysis Exc
updated 4.4 years ago by
Ram
43k • written 10.1 years ago by
Ann
★ 2.4k
1
vote
1
reply
2.7k
views
Answer:
A: why tophat finds overlong introns?
updated 4.4 years ago by
Ram
43k • written 10.1 years ago by
Ann
★ 2.4k
2
votes
1
reply
2.5k
views
Answer:
A: Upgrade to IGB 8.5.0 has lost my bookmarks and Quickload servers
updated 4.4 years ago by
Ram
43k • written 8.5 years ago by
Ann
★ 2.4k
0
votes
1
reply
2.4k
views
Answer:
A: Inconsistent display of GFF files in IGB
updated 4.5 years ago by
Ram
43k • written 8.6 years ago by
Ann
★ 2.4k
0
votes
1
reply
6.4k
views
Answer:
A: need to separate read1 and read2 to run tophat2
updated 4.6 years ago by
Ram
43k • written 9.4 years ago by
Ann
★ 2.4k
5
votes
0
replies
9.6k
views
Answer:
A: how to use a bed file with htseq-count
updated 4.6 years ago by
Ram
43k • written 9.9 years ago by
Ann
★ 2.4k
1
vote
1
reply
2.7k
views
Answer:
A: PileOMeth double counting when paired-end reads overlap?
7.6 years ago by
Ann
★ 2.4k
6
votes
1
reply
4.3k
views
Answer:
A: Big Browser : a new genom browser in development
8.2 years ago by
Ann
★ 2.4k
1
vote
1
reply
5.2k
views
Answer:
Answer: Viewing the tophat output (mapped.bam and junctions) along with genome coordinat
updated 17 months ago by
Ram
43k • written 8.9 years ago by
Ann
★ 2.4k
7
votes
0
replies
5.2k
views
Answer:
Answer: Viewing the tophat output (mapped.bam and junctions) along with genome coordinat
updated 17 months ago by
Ram
43k • written 8.9 years ago by
Ann
★ 2.4k
2
votes
0
replies
3.1k
views
Answer:
A: Can IGB load BED 6+3 files?
9.1 years ago by
Ann
★ 2.4k
0
votes
1
reply
2.6k
views
Answer:
Answer: is there a way to get splice sites from BLAST results?
updated 24 months ago by
Ram
43k • written 9.2 years ago by
Ann
★ 2.4k
2
votes
1
reply
4.3k
views
Answer:
Answer: Which genome browser to display bacterial draft genomes?
updated 2.0 years ago by
Ram
43k • written 9.2 years ago by
Ann
★ 2.4k
1
vote
1
reply
3.1k
views
Answer:
Answer: Computational requirement to host a genome browser
updated 2.2 years ago by
Ram
43k • written 9.4 years ago by
Ann
★ 2.4k
0
votes
0
replies
4.1k
views
Answer:
A: How to create your genome in IGV?
9.4 years ago by
Ann
★ 2.4k
4
votes
2
replies
2.7k
views
Answer:
Answer: Integrate a Genome Browser into a Java application
updated 2.2 years ago by
Ram
43k • written 9.4 years ago by
Ann
★ 2.4k
0
votes
0
replies
6.8k
views
Answer:
Answer: Should I log-transform microarray gene expression data before applying PCA?
updated 2.2 years ago by
Ram
43k • written 9.5 years ago by
Ann
★ 2.4k
2
votes
0
replies
3.8k
views
Answer:
Answer: IGB- genome sequence in sequence viewer just shows dashes
updated 2.2 years ago by
Ram
43k • written 9.5 years ago by
Ann
★ 2.4k
4
votes
0
replies
4.9k
views
Answer:
Answer: viewing BED Graph files on the IGB
updated 2.2 years ago by
Ram
43k • written 9.5 years ago by
Ann
★ 2.4k
2
votes
0
replies
6.0k
views
Answer:
A: what are the control samples when using MACS to find ChiP-seq peaks?
9.5 years ago by
Ann
★ 2.4k
8
votes
0
replies
25k
views
Answer:
Answer: Genomics is not Special. Computational Biologists are reinventing the wheel for
updated 2.3 years ago by
Ram
43k • written 9.5 years ago by
Ann
★ 2.4k
3
votes
0
replies
2.4k
views
Answer:
Answer: visualize tiling array file to IGB
updated 2.3 years ago by
Ram
43k • written 9.5 years ago by
Ann
★ 2.4k
0
votes
1
reply
5.6k
views
Answer:
Answer: RNA probe ids from affymetrix
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
Ann
★ 2.4k
1
vote
0
replies
3.0k
views
Answer:
Answer: Microarray data analysis for detecting alternative splicing
updated 3.1 years ago by
Ram
43k • written 9.6 years ago by
Ann
★ 2.4k
1
vote
1
reply
3.0k
views
Answer:
Answer: Microarray data analysis for detecting alternative splicing
updated 3.1 years ago by
Ram
43k • written 9.6 years ago by
Ann
★ 2.4k
1
vote
2
replies
5.0k
views
Answer:
Answer: An idea to identify batch effects
updated 2.4 years ago by
Ram
43k • written 9.7 years ago by
Ann
★ 2.4k
4
votes
1
reply
7.3k
views
Answer:
A: Pathway Analysis Tool
9.8 years ago by
Ann
★ 2.4k
3
votes
3
replies
41k
views
Answer:
Answer: How Do You Justify Your Rna-Seq Expression Threshold (Fpkm/Rpkm) ?
updated 2.5 years ago by
Ram
43k • written 9.9 years ago by
Ann
★ 2.4k
0
votes
0
replies
5.5k
views
Answer:
A: Biostar on Google Summer of Code. Suggest features that you would like to see!
9.9 years ago by
Ann
★ 2.4k
1
vote
0
replies
2.6k
views
Answer:
Answer: Why number of reads in a sample that are assigned to gene i can be modeled by a
updated 2.5 years ago by
Ram
43k • written 9.9 years ago by
Ann
★ 2.4k
16
votes
4
replies
40k
views
Answer:
Answer: Why Does Rna-Seq Read Count Fit Poisson Distribution?
updated 2.6 years ago by
Ram
43k • written 9.9 years ago by
Ann
★ 2.4k
0
votes
0
replies
3.0k
views
Answer:
A: Get all RefSeq transcripts from hg18
9.9 years ago by
Ann
★ 2.4k
3
votes
0
replies
11k
views
Answer:
Answer: which one is better EdgeR or DEGSeq?
updated 2.6 years ago by
Ram
43k • written 9.9 years ago by
Ann
★ 2.4k
1
vote
1
reply
4.9k
views
Answer:
A: Splice Junction file intersection with genome annotation
9.9 years ago by
Ann
★ 2.4k
0
votes
0
replies
4.3k
views
Answer:
A: Front End, Workflow, Or Web Interface For Bioconductor
9.9 years ago by
Ann
★ 2.4k
3
votes
1
reply
14k
views
Answer:
A: Visualize Strand-Specific Rna-Seq : How To Differentiate Strands
10.1 years ago by
Ann
★ 2.4k
6
votes
0
replies
9.0k
views
Answer:
A: Download Geo Sra Data Using Aspera Connect
10.1 years ago by
Ann
★ 2.4k
1
vote
0
replies
5.2k
views
Answer:
A: If you have a chance to ask questions to the CEO of Illumina, what would you do?
10.1 years ago by
Ann
★ 2.4k
1
vote
1
reply
6.1k
views
Answer:
A: Plant Annotation Workflow
10.1 years ago by
Ann
★ 2.4k
1
vote
0
replies
3.1k
views
Answer:
A: Is Igv Software The Only Available Software To Open Bam File
10.6 years ago by
Ann
★ 2.4k
2
votes
1
reply
2.5k
views
Answer:
A: Best Practices For Naming De Novo Transcriptome Sequences?
10.6 years ago by
Ann
★ 2.4k
1
vote
0
replies
4.9k
views
Answer:
A: Is There An Alternative For Igb Which Can Display Normalized Rna-Seq Coverages?
13.0 years ago by
Ann
★ 2.4k
3
votes
1
reply
16k
views
Answer:
A: Next Generation Read Sequence Assembly Visualization Software
13.2 years ago by
Ann
★ 2.4k
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