Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
3
votes
7
replies
1.2k
views
Need to split a cram file into smaller pieces - how to extract and save cram format to a new file?
samtools CRAM
updated 6 weeks ago by ▴ 10 • written 8 months ago by ★ 2.4k
1
vote
0
replies
1.2k
views
Comment: Comment: Need to split a cram file into smaller pieces - how to extract and save cram for
8 months ago by Ann ★ 2.4k
0
votes
2
replies
1.2k
views
Comment: Comment: Need to split a cram file into smaller pieces - how to extract and save cram for
8 months ago by Ann ★ 2.4k
2
votes
5
replies
1.4k
views
what's the genomic location and name of gene responsible for orange and black patches in calico cats
genomes
updated 12 months ago by ▴ 870 • written 12 months ago by ★ 2.4k
16
votes
10
replies
2.0k
views
6 follow
Forum: F*up Night style events for Bioinformatics ? Comment if you're interested!
mistakes
updated 12 months ago by 5.3k • written 12 months ago by ★ 2.4k
0
votes
2
replies
3.1k
views
edgeR not available for Mavericks and R 3.1
software-error RNA-Seq edgeR R
updated 3.6 years ago by 45k • written 11.0 years ago by ★ 2.4k
1
vote
1
reply
11k
views
Answer: A: what are the best resource to learn Linux bash scripting for Bioinformatics
updated 5.3 years ago by 45k • written 10.8 years ago by ★ 2.4k
2
votes
1
reply
7.2k
views
Answer: A: IGV for RNA-SEQ
updated 5.3 years ago by 45k • written 10.9 years ago by ★ 2.4k
0
votes
1
reply
2.8k
views
Comment: C: What Is The Best Way To Get Data Back Off Of Galaxy?
updated 5.3 years ago by 45k • written 11.0 years ago by ★ 2.4k
3
votes
1
reply
6.7k
views
Answer: A: Normalizing For Batch Effect In RNA-Seq Data
updated 5.3 years ago by 45k • written 11.0 years ago by ★ 2.4k
3
votes
0
replies
44k
views
Answer: A: Will Python Take The Place Of R?
updated 5.3 years ago by 45k • written 11.0 years ago by ★ 2.4k
2
votes
1
reply
20k
views
Answer: A: Is There Any Other Method For Isoform-Level Differential Expression Analysis Exc
updated 5.3 years ago by 45k • written 11.0 years ago by ★ 2.4k
1
vote
1
reply
3.0k
views
Answer: A: why tophat finds overlong introns?
updated 5.3 years ago by 45k • written 11.0 years ago by ★ 2.4k
0
votes
0
replies
2.5k
views
Comment: C: strange coordinates for Augustus-predicted gene
updated 5.4 years ago by 45k • written 9.4 years ago by ★ 2.4k
0
votes
0
replies
2.5k
views
Comment: A: strange coordinates for Augustus-predicted gene
updated 5.4 years ago by 45k • written 9.4 years ago by ★ 2.4k
2
votes
1
reply
2.9k
views
Answer: A: Upgrade to IGB 8.5.0 has lost my bookmarks and Quickload servers
updated 5.4 years ago by 45k • written 9.4 years ago by ★ 2.4k
0
votes
1
reply
2.8k
views
Answer: A: Inconsistent display of GFF files in IGB
updated 5.4 years ago by 45k • written 9.5 years ago by ★ 2.4k
0
votes
0
replies
3.0k
views
Comment: C: Can't load BED file in IGB
updated 5.4 years ago by 45k • written 9.5 years ago by ★ 2.4k
0
votes
1
reply
7.1k
views
Answer: A: need to separate read1 and read2 to run tophat2
updated 5.5 years ago by 45k • written 10.3 years ago by ★ 2.4k
0
votes
1
reply
7.1k
views
Comment: C: need to separate read1 and read2 to run tophat2
updated 5.5 years ago by 45k • written 10.4 years ago by ★ 2.4k
0
votes
2
replies
9.5k
views
Comment: C: Not having root access sucks; installing software without root privileges
updated 5.5 years ago by 45k • written 10.8 years ago by ★ 2.4k
1
vote
1
reply
9.5k
views
Comment: C: Not having root access sucks; installing software without root privileges
updated 5.5 years ago by 45k • written 10.8 years ago by ★ 2.4k
5
votes
0
replies
10k
views
Answer: A: how to use a bed file with htseq-count
updated 5.5 years ago by 45k • written 10.9 years ago by ★ 2.4k
0
votes
0
replies
10k
views
Comment: C: how to use a bed file with htseq-count
updated 5.5 years ago by 45k • written 10.9 years ago by ★ 2.4k
3
votes
1
reply
3.0k
views
what's the best kmer size for sailfish
RNA-Seq sailfish
updated 5.6 years ago by 20 • written 10.8 years ago by ★ 2.4k
15
votes
7
replies
10k
views
how to use a bed file with htseq-count
RNA-Seq htseq-count
updated 3.5 years ago by 45k • written 10.9 years ago by ★ 2.4k
7
votes
4
replies
2.0k
views
what should a SAM/BAM record contain when there are no quality scores
samtools SAM BAM
updated 7.7 years ago by ★ 1.3k • written 7.7 years ago by ★ 2.4k
1
vote
0
replies
1.6k
views
Job: Position available: Integrated Genome Browser Project, UNC-Charlotte, Charlotte, NC, USA
igb RNA-Seq java ChIP-Seq
updated 23 months ago by 45k • written 8.0 years ago by ★ 2.4k
19
votes
12
replies
8.7k
views
9 follow
What is first publication/mention of term RNA-seq
RNA-Seq
updated 3.6 years ago by 45k • written 11.0 years ago by ★ 2.4k
7
votes
3
replies
1.9k
views
testing biostars igb tag
igb
updated 3.3 years ago by 45k • written 10.6 years ago by ★ 2.4k
9
votes
11
replies
5.7k
views
9 follow
PhD programs in bioinformatics and genomics
education phd
updated 2.0 years ago by 45k • written 8.5 years ago by ★ 2.4k
4
votes
10
replies
3.2k
views
PileOMeth double counting when paired-end reads overlap?
PileOMeth Bisulfite methylation
8.5 years ago by Ann ★ 2.4k
1
vote
1
reply
3.2k
views
Answer: A: PileOMeth double counting when paired-end reads overlap?
8.5 years ago by Ann ★ 2.4k
0
votes
1
reply
2.3k
views
Comment: C: search datasets in IGB
9.0 years ago by Ann ★ 2.4k
2
votes
0
replies
5.2k
views
Comment: C: Big Browser : a new genom browser in development
9.1 years ago by Ann ★ 2.4k
0
votes
0
replies
5.2k
views
Comment: C: Big Browser : a new genom browser in development
9.1 years ago by Ann ★ 2.4k
6
votes
1
reply
5.2k
views
Answer: A: Big Browser : a new genom browser in development
9.1 years ago by Ann ★ 2.4k
0
votes
2
replies
2.7k
views
need to identify CDS (translation) for gene models predicted by Cufflinks and Stringtie
RNA-Seq stringtie cufflinks
updated 2.7 years ago by 45k • written 9.3 years ago by ★ 2.4k
6
votes
7
replies
6.8k
views
best alignment tool for Ion Torrent data
chloroplast genome iontorrent
updated 2.7 years ago by 45k • written 9.4 years ago by ★ 2.4k
0
votes
0
replies
2.5k
views
Comment: C: strange coordinates for Augustus-predicted gene
9.4 years ago by Ann ★ 2.4k
5
votes
4
replies
2.5k
views
strange coordinates for Augustus-predicted gene
genefinder augustus
updated 2.7 years ago by 45k • written 9.4 years ago by ★ 2.4k
12
votes
0
replies
2.3k
views
Forum: Please help support IGB software - need more letters of support
ChIP-Seq visualization RNA-Seq igb
updated 2.1 years ago by 45k • written 9.5 years ago by ★ 2.4k
7
votes
7
replies
6.7k
views
R packages for gene regulatory networks from time series data
RNA-Seq ChIP-Seq R
updated 3.2 years ago by 45k • written 10.5 years ago by ★ 2.4k
1
vote
0
replies
6.3k
views
Comment: C: Viewing the tophat output (mapped.bam and junctions) along with genome coordinat
9.8 years ago by Ann ★ 2.4k
0
votes
1
reply
6.3k
views
Comment: Comment: Viewing the tophat output (mapped.bam and junctions) along with genome coordinat
updated 2.4 years ago by 45k • written 9.8 years ago by ★ 2.4k
1
vote
1
reply
6.3k
views
Comment: C: Viewing the tophat output (mapped.bam and junctions) along with genome coordinat
9.8 years ago by Ann ★ 2.4k
1
vote
1
reply
6.3k
views
Comment: C: Viewing the tophat output (mapped.bam and junctions) along with genome coordinat
9.8 years ago by Ann ★ 2.4k
1
vote
1
reply
6.3k
views
Comment: C: Viewing the tophat output (mapped.bam and junctions) along with genome coordinat
9.8 years ago by Ann ★ 2.4k
0
votes
1
reply
6.3k
views
Comment: C: Viewing the tophat output (mapped.bam and junctions) along with genome coordinat
9.8 years ago by Ann ★ 2.4k
0
votes
1
reply
6.3k
views
Comment: C: Viewing the tophat output (mapped.bam and junctions) along with genome coordinat
9.8 years ago by Ann ★ 2.4k
142 results • Page 1 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6