Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
3
votes
0
replies
1.9k
views
Answer: A: Differential binding ChIP-seq/RNA-seq analysis
6.6 years ago by Gordon Smyth ★ 8.3k
1
vote
0
replies
1.3k
views
Answer: A: Gene set analysis - minimum number of genes for moderated t statistics
6.6 years ago by Gordon Smyth ★ 8.3k
3
votes
1
reply
2.9k
views
Answer: A: The optimal minMQS parameter in featureCounts for RNA-Seq quantification
6.6 years ago by Gordon Smyth ★ 8.3k
3
votes
0
replies
5.0k
views
Answer: A: Limma can make differential expression with just one case in one group?
6.6 years ago by Gordon Smyth ★ 8.3k
2
votes
0
replies
3.8k
views
Answer: A: edger differential expression analysis error
6.6 years ago by Gordon Smyth ★ 8.3k
1
vote
1
reply
3.8k
views
Comment: C: edger differential expression analysis error
6.6 years ago by Gordon Smyth ★ 8.3k
6
votes
1
reply
7.2k
views
Answer: A: Differential expression: replicates in one condition, no replicates in the other
6.6 years ago by Gordon Smyth ★ 8.3k
4
votes
2
replies
13k
views
Answer: A: How to see if adjusting batch effect in RNA-seq is working or not
6.7 years ago by Gordon Smyth ★ 8.3k
0
votes
0
replies
3.3k
views
Comment: C: How many tests does it take to warrant a microarray/RNA-seq approach to differen
7.0 years ago by Gordon Smyth ★ 8.3k
1
vote
1
reply
5.4k
views
Answer: A: Why my limma DEG result in top Table all without significant meaning,showing log
7.0 years ago by Gordon Smyth ★ 8.3k
2
votes
0
replies
3.2k
views
Comment: C: Design/contrast matrix for Multivariate experimental design in limma
7.4 years ago by Gordon Smyth ★ 8.3k
2
votes
1
reply
4.2k
views
Comment: C: [edgeR usage] Comparing categories of fewer input variables for differential gen
8.5 years ago by Gordon Smyth ★ 8.3k
0
votes
0
replies
4.1k
views
Answer: A: edgeR direction of expression and sign of Log Fold Changes
9.1 years ago by Gordon Smyth ★ 8.3k
3
votes
1
reply
8.3k
views
Answer: A: difference between voom and calcNormFactor normalization methods for RNA-Seq ana
9.3 years ago by Gordon Smyth ★ 8.3k
3
votes
0
replies
14k
views
Answer: A: Gsea Plot
9.8 years ago by Gordon Smyth ★ 8.3k
0
votes
0
replies
3.2k
views
Answer: A: GSEA For Paired Microarray Data
9.8 years ago by Gordon Smyth ★ 8.3k
3
votes
0
replies
18k
views
Answer: A: dispersion of a gene, what does it mean?
9.8 years ago by Gordon Smyth ★ 8.3k
4
votes
0
replies
7.6k
views
Answer: A: DESeq and Limma+Voom Normalization for Rna-Seq Data Using Ercc Spike-In
9.8 years ago by Gordon Smyth ★ 8.3k
2
votes
0
replies
8.1k
views
Answer: Answer: Agilent data Read & Normalize
updated 3.1 years ago by 45k • written 9.9 years ago by ★ 8.3k
0
votes
0
replies
3.8k
views
Answer: Answer: EdgeR: different values in expression and differential expression tables
updated 3.4 years ago by 45k • written 10.5 years ago by ★ 8.3k
2
votes
1
reply
3.9k
views
Answer: Answer: limma missing green channel (Agilent two color microarray)
updated 3.4 years ago by 45k • written 10.5 years ago by ★ 8.3k
0
votes
0
replies
5.7k
views
Answer: A: Limma Multiple Group Analysis
10.6 years ago by Gordon Smyth ★ 8.3k
0
votes
0
replies
8.2k
views
Comment: Comment: limma results topTable vs toptable differ
updated 3.5 years ago by 45k • written 10.6 years ago by ★ 8.3k
1
vote
0
replies
8.2k
views
Answer: Answer: limma results topTable vs toptable differ
updated 3.5 years ago by 45k • written 10.6 years ago by ★ 8.3k
3
votes
1
reply
4.3k
views
Answer: Answer: published array data not replicable with limma analysis
updated 3.4 years ago by 45k • written 10.6 years ago by ★ 8.3k
1
vote
0
replies
12k
views
Comment: Comment: How to export normalized read count in RLE method from edgeR?
updated 3.7 years ago by 45k • written 11.0 years ago by ★ 8.3k
1
vote
1
reply
12k
views
Answer: Answer: How to export normalized read count in RLE method from edgeR?
updated 3.7 years ago by 45k • written 11.0 years ago by ★ 8.3k
577 results • Page 12 of 12
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6