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Comment: C: extracting info field from VCF using vcfr
4.5 years ago by Brice Sarver ★ 3.8k
1
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0
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1.6k
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Comment: C: Need help with codeml
4.5 years ago by Brice Sarver ★ 3.8k
2
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0
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11k
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Answer: A: padj in DEseq2
4.5 years ago by Brice Sarver ★ 3.8k
1
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1
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2.0k
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Comment: C: How to make a phylogenetic tree set in ASTRAL?
4.5 years ago by Brice Sarver ★ 3.8k
3
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1
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1.6k
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Answer: A: Need help with codeml
4.5 years ago by Brice Sarver ★ 3.8k
0
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0
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1.1k
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Comment: C: coverage of narrow peaks on genomic region using bedtools
4.5 years ago by Brice Sarver ★ 3.8k
1
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1
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1.1k
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Answer: A: coverage of narrow peaks on genomic region using bedtools
4.5 years ago by Brice Sarver ★ 3.8k
0
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0
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764
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Comment: C: Meaning of minus ("-") sign in frameshift protein variant nomenclature
4.5 years ago by Brice Sarver ★ 3.8k
3
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1
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5.6k
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Answer: A: Remove or mask repeat regions from .fasta file
updated 4.5 years ago by 43k • written 8.9 years ago by ★ 3.8k
3
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0
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942
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Answer: A: Do you recommend any platform that I can use instead of an HPC?
4.5 years ago by Brice Sarver ★ 3.8k
0
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0
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1.6k
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Comment: C: Are reads with the same length and position always "duplicates"
4.5 years ago by Brice Sarver ★ 3.8k
1
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1
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1.6k
views
Comment: C: Are reads with the same length and position always "duplicates"
4.5 years ago by Brice Sarver ★ 3.8k
2
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2
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1.6k
views
Answer: A: Are reads with the same length and position always "duplicates"
4.5 years ago by Brice Sarver ★ 3.8k
3
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1
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1.2k
views
Answer: A: generating 'maximal' cds sequence from multiple isoforms of a gene
4.5 years ago by Brice Sarver ★ 3.8k
1
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0
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1.7k
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Comment: C: Annotating dbnsfp by SnpSift on a cluster
4.5 years ago by Brice Sarver ★ 3.8k
0
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1
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1.4k
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Comment: C: How to count the length of a fasta sequence and number of occurrence of a partic
4.5 years ago by Brice Sarver ★ 3.8k
3
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0
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2.0k
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Answer: Answer: split supermatrix by gene
updated 2.2 years ago by 43k • written 9.4 years ago by ★ 3.8k
1
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1
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1.7k
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Answer: A: Annotating dbnsfp by SnpSift on a cluster
4.5 years ago by Brice Sarver ★ 3.8k
0
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1
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1.7k
views
Comment: C: Annotating dbnsfp by SnpSift on a cluster
4.5 years ago by Brice Sarver ★ 3.8k
5
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0
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963
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Answer: A: Purpose of concatenation
4.6 years ago by Brice Sarver ★ 3.8k
1
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0
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1.7k
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Comment: C: How to interpret a phylogenetic tree
4.6 years ago by Brice Sarver ★ 3.8k
0
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1
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4.6k
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Comment: C: Help needed with Biopython and Spyder
4.6 years ago by Brice Sarver ★ 3.8k
0
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0
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1.1k
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Comment: C: bcftools -trim-alt-alleles errors
4.6 years ago by Brice Sarver ★ 3.8k
0
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0
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1.1k
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Answer: A: Determine level of heterozygosity
4.6 years ago by Brice Sarver ★ 3.8k
0
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0
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13k
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Comment: C: samtools index error
4.6 years ago by Brice Sarver ★ 3.8k
0
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1
reply
13k
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Comment: C: samtools index error
4.6 years ago by Brice Sarver ★ 3.8k
0
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1
reply
13k
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Comment: C: samtools index error
4.6 years ago by Brice Sarver ★ 3.8k
1
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1
reply
13k
views
Answer: A: samtools index error
4.6 years ago by Brice Sarver ★ 3.8k
0
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1
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1.0k
views
Answer: A: Combine several VCF files
4.6 years ago by Brice Sarver ★ 3.8k
0
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0
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1.4k
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Comment: C: Multiple test correction in Hyphy Analysis ?
4.6 years ago by Brice Sarver ★ 3.8k
4
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1
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1.4k
views
Answer: A: Multiple test correction in Hyphy Analysis ?
4.6 years ago by Brice Sarver ★ 3.8k
0
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0
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1.1k
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Answer: A: How to download large amount of data from NCBI?
4.6 years ago by Brice Sarver ★ 3.8k
0
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0
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2.8k
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Answer: A: Import VCF from GnomAD
4.6 years ago by Brice Sarver ★ 3.8k
0
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0
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1.2k
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Comment: C: Population Genetics from SNP data- no VCF
4.6 years ago by Brice Sarver ★ 3.8k
2
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1
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1.8k
views
Answer: A: Building gene trees
4.6 years ago by Brice Sarver ★ 3.8k
0
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0
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654
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Answer: A: identify disease related variants with RNA-seq
4.6 years ago by Brice Sarver ★ 3.8k
1
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0
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692
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Answer: A: Pipeline for familial sequencing
4.6 years ago by Brice Sarver ★ 3.8k
0
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0
replies
631
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Comment: C: Advice for an Internship in France/Switzerland
4.6 years ago by Brice Sarver ★ 3.8k
0
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1
reply
1.5k
views
Comment: C: Issue with phytools phyl.pca and scores() feature
4.6 years ago by Brice Sarver ★ 3.8k
2
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0
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2.5k
views
Answer: A: Drop tip from multiPhylo object in R
4.6 years ago by Brice Sarver ★ 3.8k
0
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0
replies
844
views
Comment: C: Best practices for analysing protein (amino acid) sequences?
4.7 years ago by Brice Sarver ★ 3.8k
0
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1
reply
1.4k
views
Comment: C: how do I default to /dev/null in CommandLineTool
4.7 years ago by Brice Sarver ★ 3.8k
1
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0
replies
3.5k
views
Answer: A: CrossMap VCF liftover (GRCh37 > GRCh38): END info field for indel calls not lift
4.7 years ago by Brice Sarver ★ 3.8k
0
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0
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3.5k
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Comment: C: CrossMap VCF liftover (GRCh37 > GRCh38): END info field for indel calls not lift
4.7 years ago by Brice Sarver ★ 3.8k
1
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0
replies
24k
views
Comment: C: ModuleNotFoundError: No module named 'Bio'
4.7 years ago by Brice Sarver ★ 3.8k
0
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0
replies
1.1k
views
Answer: A: Bootstrap values in Gubbins final tree
4.7 years ago by Brice Sarver ★ 3.8k
1
vote
1
reply
3.5k
views
Comment: C: CrossMap VCF liftover (GRCh37 > GRCh38): END info field for indel calls not lift
4.7 years ago by Brice Sarver ★ 3.8k
1
vote
2
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24k
views
Answer: A: ModuleNotFoundError: No module named 'Bio'
4.7 years ago by Brice Sarver ★ 3.8k
0
votes
1
reply
3.5k
views
Comment: C: CrossMap VCF liftover (GRCh37 > GRCh38): END info field for indel calls not lift
4.7 years ago by Brice Sarver ★ 3.8k
1
vote
0
replies
901
views
Answer: A: Seeking Tutorial on codon subsitution model and how we can develop more robust
4.7 years ago by Brice Sarver ★ 3.8k
380 results • Page 2 of 8
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