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0
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2.6k
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Comment: C: Truncating BAM Files
10.0 years ago by Antonio R. Franco ★ 5.2k
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1
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2.1k
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Answer: A: DGE using trinity
10.0 years ago by Antonio R. Franco ★ 5.2k
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0
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3.7k
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Comment: C: Questions about using Bowtie2
10.0 years ago by Antonio R. Franco ★ 5.2k
2
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1
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3.7k
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Answer: Answer: Questions about using Bowtie2
20 months ago by Antonio R. Franco ★ 5.2k
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1
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4.7k
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Comment: C: Is there any differences between tophat, cufflinks command with and without GTF
10.0 years ago by Antonio R. Franco ★ 5.2k
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3.0k
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Answer: A: How to predict the function of hypothetical proteins
10.0 years ago by Antonio R. Franco ★ 5.2k
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0
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3.5k
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Comment: C: RNAseq of total RNA
10.0 years ago by Antonio R. Franco ★ 5.2k
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1
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3.5k
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Answer: A: RNAseq of total RNA
10.0 years ago by Antonio R. Franco ★ 5.2k
3
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5
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4.3k
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Synchronization of fastq files
Assembly velvet
updated 3.2 years ago by 45k • written 10.0 years ago by ★ 5.2k
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0
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4.3k
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Comment: C: Synchronization of fastq files
10.0 years ago by Antonio R. Franco ★ 5.2k
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0
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2.1k
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Answer: A: Alignment read number differ between topHat2 and bwa
10.0 years ago by Antonio R. Franco ★ 5.2k
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0
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3.4k
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Answer: A: Help for changing fasta seq ID
10.0 years ago by Antonio R. Franco ★ 5.2k
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0
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10k
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Answer: A: Where To Find The Genome Sizes Of Sequenced Plant Species?
10.0 years ago by Antonio R. Franco ★ 5.2k
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0
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8.1k
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Comment: C: FINAL CALL: Epigenetics Workshop - DNA Methylation Data Analysis (only 1 seat le
10.0 years ago by Antonio R. Franco ★ 5.2k
1
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18k
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Answer: A: which one is better to do, blastx or blastp?
10.0 years ago by Antonio R. Franco ★ 5.2k
0
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1
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8.1k
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Answer: A: FINAL CALL: Epigenetics Workshop - DNA Methylation Data Analysis (only 1 seat le
10.0 years ago by Antonio R. Franco ★ 5.2k
1
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0
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2.2k
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Answer: A: Unusual bacterial start codons when using tBLASTn
10.0 years ago by Antonio R. Franco ★ 5.2k
0
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0
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2.7k
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Comment: C: clustalw2 output format
10.0 years ago by Antonio R. Franco ★ 5.2k
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0
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11k
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Comment: C: Downloading SRA data by prefetch command
10.0 years ago by Antonio R. Franco ★ 5.2k
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0
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3.7k
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Answer: A: batch program to convert nucleotide into protein
10.0 years ago by Antonio R. Franco ★ 5.2k
1
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1
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18k
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Comment: C: which one is better to do, blastx or blastp?
10.0 years ago by Antonio R. Franco ★ 5.2k
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0
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3.0k
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Comment: C: Multialignment of proteins sequences
10.0 years ago by Antonio R. Franco ★ 5.2k
0
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1
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3.0k
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Answer: Answer: Multialignment of proteins sequences
updated 3.2 years ago by 45k • written 10.0 years ago by ★ 5.2k
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1
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3.8k
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Comment: Comment: .gtf file error in Tophat2 - Error at parsing .tlst line (invalid strand):
10.0 years ago by Antonio R. Franco ★ 5.2k
0
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1
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3.0k
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Comment: C: Tophat, low alignement left read
10.0 years ago by Antonio R. Franco ★ 5.2k
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1
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12k
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Comment: C: From FASTA file to GO-annotation
10.0 years ago by Antonio R. Franco ★ 5.2k
1
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1
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5.0k
views
Cuffcompare. Differences between class codes "=" and "i"
cufflinks RNA-Seq
updated 10.0 years ago by 6.7k • written 10.0 years ago by ★ 5.2k
1
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1
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3.8k
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Comment: C: Next generation sequencing methodology
10.0 years ago by Antonio R. Franco ★ 5.2k
0
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1
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7.2k
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Comment: C: reverse complement in Assembly!
10.1 years ago by Antonio R. Franco ★ 5.2k
1
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0
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2.8k
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Answer: A: Quality control for AB Solid fastq files
10.1 years ago by Antonio R. Franco ★ 5.2k
0
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0
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3.2k
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Answer: A: improving de novo genome assembly
10.1 years ago by Antonio R. Franco ★ 5.2k
3
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1
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11k
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Answer: A: How many reads should I expect for paired end reads when coverage = 30 million?
10.1 years ago by Antonio R. Franco ★ 5.2k
3
votes
3
replies
2.8k
views
Struggling with the information contained into a BAM/SAM file
SAM aligment BAM
updated 3.2 years ago by 45k • written 10.1 years ago by ★ 5.2k
1
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1
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19k
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Comment: C: paired end illumina reads
10.1 years ago by Antonio R. Franco ★ 5.2k
1
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1
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19k
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Answer: A: paired end illumina reads
10.1 years ago by Antonio R. Franco ★ 5.2k
0
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1
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4.0k
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Answer: A: CPG island annotation with gene
10.1 years ago by Antonio R. Franco ★ 5.2k
0
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0
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8.7k
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Comment: C: normalization with DEseq2
10.1 years ago by Antonio R. Franco ★ 5.2k
1
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0
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5.2k
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Answer: A: if the DEseq package already installed?
10.1 years ago by Antonio R. Franco ★ 5.2k
2
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1
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5.2k
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Answer: A: if the DEseq package already installed?
10.1 years ago by Antonio R. Franco ★ 5.2k
0
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1
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4.9k
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Answer: A: Is using MinION to sequence DNA for the purpose of genome assembly a good idea?
10.1 years ago by Antonio R. Franco ★ 5.2k
2
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0
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15k
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Answer: A: Bowtie2 vs Tophat Whats the difference
10.1 years ago by Antonio R. Franco ★ 5.2k
2
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0
replies
2.3k
views
Answer: Answer: Fold changes for different gene expression datasets?
updated 3.2 years ago by 45k • written 10.1 years ago by ★ 5.2k
0
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1
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4.8k
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Answer: Answer: How to interpret the difference among these three options in strandedness from H
updated 3.2 years ago by 45k • written 10.1 years ago by ★ 5.2k
1
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1
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5.8k
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Answer: A: How to separate htseq-count table to coding RNAs and non-coding RNAs
10.1 years ago by Antonio R. Franco ★ 5.2k
0
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1
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9.1k
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Comment: C: How to annotate coding and long non-coding RNA together using transcriptome data
10.2 years ago by Antonio R. Franco ★ 5.2k
3
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1
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9.1k
views
Answer: A: How to annotate coding and long non-coding RNA together using transcriptome data
10.2 years ago by Antonio R. Franco ★ 5.2k
0
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0
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7.2k
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Comment: A: How can I retrieve the sequence of a gene and the start and end genomic position
10.2 years ago by Antonio R. Franco ★ 5.2k
2
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0
replies
2.5k
views
Answer: Answer: any solution to multiple alignment rate in eukaryotes
updated 3.1 years ago by 45k • written 10.2 years ago by ★ 5.2k
0
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1
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11k
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Answer: A: How do I compute the effective genome size?
10.2 years ago by Antonio R. Franco ★ 5.2k
0
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0
replies
2.5k
views
Answer: A: Bisulfite sequencing analysis
10.2 years ago by Antonio R. Franco ★ 5.2k
683 results • Page 11 of 14
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