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Answer: Answer: why i cant have sam, sorted bam or bed by tophat output?
updated 3.1 years ago by 45k • written 10.2 years ago by ★ 5.2k
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Comment: C: comparing mapping results in two tools
10.2 years ago by Antonio R. Franco ★ 5.2k
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Answer: A: comparing mapping results in two tools
10.2 years ago by Antonio R. Franco ★ 5.2k
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Answer: A: FastQC quality control graphics for publication?
10.2 years ago by Antonio R. Franco ★ 5.2k
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Answer: Answer: Fast tool for de novo motif search
updated 3.1 years ago by 45k • written 10.2 years ago by ★ 5.2k
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Answer: Answer: Where is it possible to submit annotated eukaryote genomes?
updated 3.1 years ago by 45k • written 10.2 years ago by ★ 5.2k
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Answer: A: fastq compression tools of choice
10.2 years ago by Antonio R. Franco ★ 5.2k
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Answer: Answer: Where is it possible to submit annotated eukaryote genomes?
updated 3.1 years ago by 45k • written 10.2 years ago by ★ 5.2k
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Answer: A: Finding structural variations in bacteria
10.2 years ago by Antonio R. Franco ★ 5.2k
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2.5k
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Comment: C: Where can I find verbose explanations of GO terms?
10.2 years ago by Antonio R. Franco ★ 5.2k
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Answer: Answer: how to integrate the blastx output into transcriptome assembly?
updated 3.1 years ago by 45k • written 10.2 years ago by ★ 5.2k
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Recommended coverage for methylome analysis
bisulfite sequencing methylation
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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Comment: Comment: Suggestions for RNA seq pipeline
updated 3.4 years ago by 45k • written 10.3 years ago by ★ 5.2k
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Answer: Answer: What are the potential challegnes in non-coding transcriptome?
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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Comment: Comment: BLAST result is different between Sanger forward and reverse reads
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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Comment: Comment: BLAST result is different between Sanger forward and reverse reads
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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5
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limma: can a separate channel microarray analysis done with this setup
limma microarray
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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Answer: A: limma: can a separate channel microarray analysis done with this setup
10.3 years ago by Antonio R. Franco ★ 5.2k
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Comment: Comment: limma: can a separate channel microarray analysis done with this setup
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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Comment: C: Using PhiX to estimate bisulfite conversion rate
10.3 years ago by Antonio R. Franco ★ 5.2k
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Answer: Answer: Using PhiX to estimate bisulfite conversion rate
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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Comment: C: Qc And Coverage From Paired-End Reads
10.3 years ago by Antonio R. Franco ★ 5.2k
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Answer: Answer: Recoding columns independently of one another in R
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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Answer: A: differentially expressed genes
10.3 years ago by Antonio R. Franco ★ 5.2k
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Answer: Answer: Alternatives to Tophat and Trinity for calculating differentially expressed gene
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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Answer: Answer: Universal primer design
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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Answer: Answer: Computational identification of long non-coding RNA(lncRNAs) in plants
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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Answer: Answer: Deseq web-based (with GUI)
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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1
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2.7k
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Answer: Answer: annotating Agilent Drosophila microarray probes by BLAST
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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1
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Answer: Answer: Updating the Bowtie2 to version 2.2.5
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 5.2k
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Answer: A: A Guide to DNA Sequencing Techniques Part 1
10.3 years ago by Antonio R. Franco ★ 5.2k
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Answer: Answer: What program do I use to generate a single contig given a set of short contigs a
updated 2.9 years ago by 45k • written 10.3 years ago by ★ 5.2k
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Answer: A: How do I acertain synteny with a partially assembled genome
10.4 years ago by Antonio R. Franco ★ 5.2k
2
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1
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7.5k
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Answer: Answer: install package from local zip file
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 5.2k
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1
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6.3k
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Answer: A: Functional Annotation of Tomato Transcriptome
10.4 years ago by Antonio R. Franco ★ 5.2k
2
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News: The NAR annual Web Server Issue is here..
web-servers
updated 2.6 years ago by 45k • written 10.4 years ago by ★ 5.2k
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Comment: A: microarray data sets counting
10.4 years ago by Antonio R. Franco ★ 5.2k
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6.6k
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Answer: A: view of a circular viral genome and its annotation
10.4 years ago by Antonio R. Franco ★ 5.2k
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1
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7.1k
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Comment: Comment: Can I use own transcriptome without GTF file?
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 5.2k
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Answer: A: Hardware Recommendations: 1 Terabyte of RAM?
10.4 years ago by Antonio R. Franco ★ 5.2k
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1
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9.1k
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Answer: A: Analysis gff3 file
10.4 years ago by Antonio R. Franco ★ 5.2k
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2
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Answer: Answer: Count number of mapped raw reads for each transcript in SAM file
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 5.2k
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Comment: C: From colorspace to basespace format
10.4 years ago by Antonio R. Franco ★ 5.2k
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1
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4.7k
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Answer: A: From colorspace to basespace format
10.4 years ago by Antonio R. Franco ★ 5.2k
1
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1
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10k
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Answer: Answer: How can I BLAST 4,54,871 sequences?
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 5.2k
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Comment: C: Softwares for gene annotation
10.4 years ago by Antonio R. Franco ★ 5.2k
1
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1
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8.0k
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Answer: A: Softwares for gene annotation
10.4 years ago by Antonio R. Franco ★ 5.2k
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1
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4.7k
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Answer: Answer: From colorspace to basespace format
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 5.2k
1
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1
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4.7k
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Answer: Answer: From colorspace to basespace format
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 5.2k
0
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7.0k
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Answer: Answer: how to find in database the genomic sequence corresponding to the amino acid on
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 5.2k
683 results • Page 12 of 14
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