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3
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1
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3.8k
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Answer: A: Ensembl Perl API - How to get genotype frequencies
updated 5.0 years ago by 44k • written 9.2 years ago by ▴ 570
0
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2
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3.4k
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Comment: C: Named variants to Rsids or coordinates or Haplotype?
updated 5.0 years ago by 44k • written 9.4 years ago by ▴ 570
5
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0
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2.5k
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Answer: A: VEP JSON output parsing
7.3 years ago by EnsemblWill ▴ 570
4
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0
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4.2k
views
Answer: A: How to filter mutant allele frequency in Variant Effect Predictor (VEP)?
7.4 years ago by EnsemblWill ▴ 570
3
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1
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2.2k
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Answer: A: Why annotation doesn't respect VCF field schema ?
7.7 years ago by EnsemblWill ▴ 570
0
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0
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3.6k
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Answer: A: Using VEP: Variant Effect Predictor, how do I get the 1000G global Allele Freque
7.9 years ago by EnsemblWill ▴ 570
1
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1
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3.9k
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Answer: A: Plugin 'dbNSFP' of VEP went wrong
8.2 years ago by EnsemblWill ▴ 570
2
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0
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12k
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Comment: C: Annotating TCGA MAFs with the latest Ensembl/Gencode transcripts
updated 8.4 years ago by 147k • written 8.4 years ago by ▴ 570
3
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1
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6.8k
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Answer: A: VEP failed to parse TBX_GENERIC error
9.1 years ago by EnsemblWill ▴ 570
0
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0
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3.8k
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Comment: Comment: Ensembl Perl API - How to get genotype frequencies
updated 2.1 years ago by 44k • written 9.2 years ago by ▴ 570
1
vote
0
replies
2.4k
views
Answer: Answer: Ensembl variant effect predictor bigWigToWig
updated 23 months ago by 44k • written 9.4 years ago by ▴ 570
1
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1
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2.8k
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Comment: Comment: ANNOVAR ability to report reference and mutant codon
updated 22 months ago by 44k • written 9.4 years ago by ▴ 570
0
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0
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3.4k
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Comment: C: Named variants to Rsids or coordinates or Haplotype?
9.4 years ago by EnsemblWill ▴ 570
3
votes
0
replies
4.8k
views
Answer: Answer: How to annotate a VCF with Entrez Gene IDs
updated 22 months ago by 44k • written 9.5 years ago by ▴ 570
3
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1
reply
2.9k
views
Answer: Answer: Variant Effect Predictor warnings Chromosome 'p' not found in cache
updated 21 months ago by 44k • written 9.5 years ago by ▴ 570
0
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0
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6.1k
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Comment: Comment: VCF format conventions for multi-sample vs. single-sample data
updated 21 months ago by 44k • written 9.5 years ago by ▴ 570
4
votes
0
replies
2.9k
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Answer: Answer: How to find all the Somatic Mutations in a Chromosome
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 570
0
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0
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2.4k
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Comment: C: Splice Site Frequency/ Pathogenicity Data
9.6 years ago by EnsemblWill ▴ 570
0
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1
reply
4.5k
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Comment: Comment: VEP: SIFT- PolyPhen error?
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 570
0
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1
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4.5k
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Comment: C: VEP: SIFT- PolyPhen error?
9.6 years ago by EnsemblWill ▴ 570
0
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1
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4.5k
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Comment: Comment: VEP: SIFT- PolyPhen error?
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 570
0
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0
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4.5k
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Comment: C: VEP: SIFT- PolyPhen error?
9.6 years ago by EnsemblWill ▴ 570
5
votes
0
replies
5.4k
views
Answer: Answer: Variant Effect Predictor plugin for ExAC frequencies
updated 2.5 years ago by 44k • written 9.7 years ago by ▴ 570
0
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1
reply
9.9k
views
Comment: C: Obtain MAF from VCF
9.7 years ago by EnsemblWill ▴ 570
0
votes
1
reply
9.9k
views
Comment: Comment: Obtain MAF from VCF
updated 2.5 years ago by 44k • written 9.7 years ago by ▴ 570
4
votes
1
reply
5.5k
views
Answer: Answer: memory usage and run time for VEP whole genome variant annotation?
updated 2.5 years ago by 44k • written 9.7 years ago by ▴ 570
1
vote
2
replies
9.9k
views
Comment: Comment: Obtain MAF from VCF
updated 2.5 years ago by 44k • written 9.7 years ago by ▴ 570
0
votes
1
reply
9.9k
views
Comment: Comment: Obtain MAF from VCF
updated 2.5 years ago by 44k • written 9.7 years ago by ▴ 570
2
votes
1
reply
9.9k
views
Answer: Answer: Obtain MAF from VCF
updated 2.5 years ago by 44k • written 9.7 years ago by ▴ 570
0
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0
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9.9k
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Comment: C: Obtain MAF from VCF
9.7 years ago by EnsemblWill ▴ 570
1
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0
replies
2.0k
views
Answer: Answer: extract/download graphs from VEP summary page?
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 570
7
votes
2
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6.4k
views
Answer: Answer: Ensembl VEP filtering most_severe keeping Symbol, Feature,Consequence etc.
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 570
4
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1
reply
9.1k
views
Answer: Answer: HGVS to VCF conversion
updated 2.9 years ago by 44k • written 10.0 years ago by ▴ 570
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