Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
7
votes
0
replies
6.0k
views
Answer: A: How to filter short length blast results from output
updated 3.3 years ago by 38k • written 7.4 years ago by ★ 1.8k
1
vote
2
replies
5.5k
views
Comment: C: Rename Duplicate ID's for Different Fasta Sequences on Windows 7
updated 3.5 years ago by 38k • written 8.1 years ago by ★ 1.8k
2
votes
1
reply
5.5k
views
Comment: C: Rename Duplicate ID's for Different Fasta Sequences on Windows 7
updated 3.5 years ago by 38k • written 8.1 years ago by ★ 1.8k
0
votes
0
replies
2.2k
views
Answer: A: Using R to calculate diversity between hundreds of orthologous sequences
updated 3.5 years ago by 38k • written 8.2 years ago by ★ 1.8k
1
vote
1
reply
2.9k
views
Comment: C: Redundancy removal before HMM profiles are made ?
updated 3.5 years ago by 38k • written 8.3 years ago by ★ 1.8k
1
vote
0
replies
2.6k
views
Answer: A: Best way to find phage genes in microbiome?
updated 3.5 years ago by 38k • written 8.4 years ago by ★ 1.8k
1
vote
0
replies
14k
views
Answer: A: Available pipelines for functional annotaiton (COG, KEGG, GO) of genomes
updated 3.5 years ago by 38k • written 8.4 years ago by ★ 1.8k
0
votes
1
reply
2.3k
views
Answer: Answer: how to test if BLAST installed in perl script?
updated 12 months ago by 38k • written 8.3 years ago by ★ 1.8k
0
votes
1
reply
2.3k
views
Comment: C: how to test if BLAST installed in perl script?
updated 3.6 years ago by 38k • written 8.3 years ago by ★ 1.8k
4
votes
2
replies
33k
views
Comment: C: BLAST, setting maximum number of hits
updated 4.1 years ago by 38k • written 8.1 years ago by ★ 1.8k
0
votes
0
replies
3.7k
views
Answer: Answer: How to know the query coverage
updated 6 months ago by 38k • written 7.4 years ago by ★ 1.8k
0
votes
2
replies
2.4k
views
Answer: A: -perc_query in local blast searches
7.4 years ago by Siva ★ 1.8k
0
votes
0
replies
1.9k
views
Answer: A: Stop BLAST search on any hit
7.4 years ago by Siva ★ 1.8k
0
votes
0
replies
8.7k
views
Comment: Comment: get protein sequences from genbank
updated 6 months ago by 38k • written 7.5 years ago by ★ 1.8k
2
votes
1
reply
3.7k
views
Answer: A: Database to download HMMs for TIGRFAMS and PFAMS ?
7.5 years ago by Siva ★ 1.8k
0
votes
0
replies
3.0k
views
Answer: A: Downloading protein sequences for a set of chromosomes from NCBI
7.5 years ago by Siva ★ 1.8k
0
votes
0
replies
1.6k
views
Answer: Answer: Identify homolog sequences that appear in multiple RefSeq files
updated 6 months ago by 38k • written 7.5 years ago by ★ 1.8k
0
votes
1
reply
3.9k
views
Comment: Comment: What is in the NCBI chromosome nucleotide database vs nt/refseq_genomic?
updated 6 months ago by 38k • written 7.5 years ago by ★ 1.8k
0
votes
0
replies
3.3k
views
Comment: C: Extract sequences based on keywords in headers (no perl or python code)
7.5 years ago by Siva ★ 1.8k
2
votes
1
reply
3.9k
views
Answer: Answer: What is in the NCBI chromosome nucleotide database vs nt/refseq_genomic?
updated 6 months ago by 38k • written 7.5 years ago by ★ 1.8k
1
vote
0
replies
1.5k
views
Comment: C: what is the best way to look up for a certain nucleotide seq in a specific organ
8.0 years ago by Siva ★ 1.8k
1
vote
0
replies
2.9k
views
Comment: C: Homology ratio for different species query
8.0 years ago by Siva ★ 1.8k
0
votes
1
reply
4.8k
views
Comment: C: "Protein search using Blastp" vs "protein search using hmm profile"
8.1 years ago by Siva ★ 1.8k
1
vote
1
reply
4.8k
views
Answer: A: "Protein search using Blastp" vs "protein search using hmm profile"
8.1 years ago by Siva ★ 1.8k
0
votes
0
replies
3.3k
views
Answer: A: Mapping peptide to the source genomic region
8.1 years ago by Siva ★ 1.8k
1
vote
0
replies
5.7k
views
Comment: C: Low bootstrap phylogenetic trees
8.1 years ago by Siva ★ 1.8k
0
votes
0
replies
13k
views
Comment: Comment: BLAST via Biopython NCBIWWW. Where can I find the complete database list?
updated 11 months ago by 38k • written 8.1 years ago by ★ 1.8k
2
votes
1
reply
1.3k
views
Forum: If cars were made by bioinformaticians...
bioinfomatics-humor
updated 11 months ago by 38k • written 8.1 years ago by ★ 1.8k
0
votes
1
reply
1.9k
views
Comment: Comment: Can I reach NCBI protein sequences with their corresponding NCBI urls?
updated 11 months ago by 38k • written 8.1 years ago by ★ 1.8k
5
votes
1
reply
1.9k
views
Answer: A: Can I reach NCBI protein sequences with their corresponding NCBI urls?
8.1 years ago by Siva ★ 1.8k
7
votes
2
replies
13k
views
Answer: Answer: BLAST via Biopython NCBIWWW. Where can I find the complete database list?
updated 11 months ago by 38k • written 8.1 years ago by ★ 1.8k
0
votes
1
reply
13k
views
Comment: Comment: BLAST via Biopython NCBIWWW. Where can I find the complete database list?
updated 11 months ago by 38k • written 8.1 years ago by ★ 1.8k
0
votes
1
reply
13k
views
Comment: Comment: BLAST via Biopython NCBIWWW. Where can I find the complete database list?
updated 11 months ago by 38k • written 8.1 years ago by ★ 1.8k
1
vote
1
reply
13k
views
Comment: Comment: BLAST via Biopython NCBIWWW. Where can I find the complete database list?
updated 11 months ago by 38k • written 8.2 years ago by ★ 1.8k
0
votes
0
replies
1.9k
views
Answer: Answer: Cancer related Pathway Annotations
updated 11 months ago by 38k • written 8.2 years ago by ★ 1.8k
0
votes
0
replies
1.9k
views
Answer: Answer: makeblastdb with organism names instead of gi number
updated 11 months ago by 38k • written 8.2 years ago by ★ 1.8k
0
votes
0
replies
3.6k
views
Answer: Answer: Draw heatmaps for large dataset 2000x40
updated 11 months ago by 38k • written 8.2 years ago by ★ 1.8k
3
votes
0
replies
1.5k
views
Answer: Answer: What is this alignment program? [Pictured]
updated 11 months ago by 38k • written 8.2 years ago by ★ 1.8k
2
votes
1
reply
2.1k
views
Answer: A: Terminology for "amino acid frame"
8.2 years ago by Siva ★ 1.8k
0
votes
0
replies
2.7k
views
Answer: A: Raxml continue interrupted bootstrap run
8.2 years ago by Siva ★ 1.8k
1
vote
0
replies
3.4k
views
Answer: A: Homologous gene matching between mouse and human
8.2 years ago by Siva ★ 1.8k
2
votes
0
replies
3.9k
views
Answer: A: Makeblastdb - parallel speed ups?
8.2 years ago by Siva ★ 1.8k
0
votes
1
reply
4.6k
views
Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 12 months ago by 38k • written 8.2 years ago by ★ 1.8k
0
votes
1
reply
4.6k
views
Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 12 months ago by 38k • written 8.2 years ago by ★ 1.8k
0
votes
1
reply
4.6k
views
Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 12 months ago by 38k • written 8.2 years ago by ★ 1.8k
0
votes
0
replies
4.6k
views
Comment: Comment: Removing identifier with "unavailable sequence" from FASTA file
updated 12 months ago by 38k • written 8.2 years ago by ★ 1.8k
1
vote
1
reply
4.6k
views
Answer: Answer: Removing identifier with "unavailable sequence" from FASTA file
updated 12 months ago by 38k • written 8.2 years ago by ★ 1.8k
0
votes
0
replies
3.0k
views
Comment: Comment: restricting number of hits for blastn execution format
updated 12 months ago by 38k • written 8.2 years ago by ★ 1.8k
1
vote
1
reply
2.1k
views
Comment: Comment: USEARCH for orthologous genes identification
updated 12 months ago by 38k • written 8.2 years ago by ★ 1.8k
2
votes
1
reply
3.3k
views
Comment: Comment: BLAST result showing greater sequence length in %identities than that of the que
updated 12 months ago by 38k • written 8.2 years ago by ★ 1.8k
149 results • Page 1 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6